RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 ABHD18Q0P651 414 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 AMZ1Q400G9 498 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 HYIQ5T013 277 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 MPP7Q5T2T1 576 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 PIP5KL1Q5T9C9 394 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 CLEC20AQ6ZU45 233 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 NYAP1Q6ZVC0 841 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 CCDC186Q7Z3E2 898 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 RD3Q7Z3Z2 195 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 SPRED1Q7Z699 444 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 APLFQ8IW19 511 aaPredicted RBP7.05□□□□□ -1.28
CHD3-213ENST00000571249 NRSN1Q8IZ57 195 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 CARNMT1Q8N4J0 409 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 ZNF557Q8N988 423 aaPredicted RBP7.05□□□□□ -1.28
CHD3-213ENST00000571249 GPT2Q8TD30 523 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 OR8D1Q8WZ84 308 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 PNPLA2Q96AD5 504 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 RTP4Q96DX8 246 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 CCDC74BQ96LY2 380 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 NUDT22Q9BRQ3 303 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 CBWD1Q9BRT8 395 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 DDA1Q9BW61 102 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 SLC13A1Q9BZW2 595 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 TSPAN10Q9H1Z9 355 aaPredicted RBP7.05□□□□□ -1.28
CHD3-213ENST00000571249 ST6GALNAC4Q9H4F1 302 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 ZSCAN16Q9H4T2 348 aaPredicted RBP7.05□□□□□ -1.28
CHD3-213ENST00000571249 FAM49BQ9NUQ9 324 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 KLHL42Q9P2K6 505 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 GPR34Q9UPC5 381 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 PPP1R12AO14974 1030 aaPredicted RBP7.04□□□□□ -1.28
CHD3-213ENST00000571249 TBCAO75347 108 aaKnown RBP7.04□□□□□ -1.28
CHD3-213ENST00000571249 KATNA1O75449 491 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 KIF20AO95235 890 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 FOSL1P15407 271 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 PCSK2P16519 638 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 GARTP22102 1010 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 PCSK6P29122 969 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 NNMTP40261 264 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 KIR3DL1P43629 444 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 NDST1P52848 882 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 MYL6P60660 151 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 GUCY1B3Q02153 619 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 MAP9Q49MG5 647 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 FSCBQ5H9T9 825 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 DCAF12Q5T6F0 453 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 FAXCQ5TGI0 409 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 PIK3R6Q5UE93 754 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 PAPD7Q5XG87 772 aaKnown RBP7.04□□□□□ -1.28
CHD3-213ENST00000571249 ATL3Q6DD88 541 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 BNC2Q6ZN30 1099 aaPredicted RBP7.04□□□□□ -1.28
CHD3-213ENST00000571249 ZNF720Q7Z2F6 126 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 APCDD1Q8J025 514 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 C12orf29Q8N999 325 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 OR6C4Q8NGE1 309 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 FRS2Q8WU20 508 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 CDK5RAP3Q96JB5 506 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 TBATAQ96M53 351 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 BARD1Q99728 777 aaKnown RBP7.04□□□□□ -1.28
CHD3-213ENST00000571249 SLC17A9Q9BYT1 436 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 ASPSCR1Q9BZE9 553 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 TWSG1Q9GZX9 223 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 CXXC4Q9H2H0 198 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 APPL1Q9UKG1 709 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 EXOC7Q9UPT5 735 aa7.04□□□□□ -1.28
CHD3-213ENST00000571249 PCDHGA9Q9Y5G4 932 aaKnown RBP7.04□□□□□ -1.28
CHD3-213ENST00000571249 SONP18583 2426 aaKnown RBP7.03□□□□□ -1.28
CHD3-213ENST00000571249 PIPSLA2A3N6 862 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 GOLGA6L3A6NEY3 463 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 RNF212BA8MTL3 300 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 RNF103O00237 685 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 FPGTO14772 594 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 HGSO14964 777 aaPredicted RBP7.03□□□□□ -1.28
CHD3-213ENST00000571249 SNPHO15079 494 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 TPD52L2O43399 206 aaKnown RBP7.03□□□□□ -1.28
CHD3-213ENST00000571249 DNAJC6O75061 913 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 LRCH4O75427 683 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 SIX3O95343 332 aaPredicted RBP7.03□□□□□ -1.28
CHD3-213ENST00000571249 MOCS3O95396 460 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 DLSTP36957 453 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 STAT5AP42229 794 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 GDF10P55107 478 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 OR1D5P58170 312 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 YWHAGP61981 247 aaKnown RBP eCLIP7.03□□□□□ -1.28
CHD3-213ENST00000571249 UBE2HP62256 183 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 KRT85P78386 507 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 B4GALNT1Q00973 533 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 DNM1Q05193 864 aaKnown RBP7.03□□□□□ -1.28
CHD3-213ENST00000571249 TRPC3Q13507 836 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 CDH18Q13634 790 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 SURF1Q15526 300 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 CRB2Q5IJ48 1285 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 DMRTA1Q5VZB9 504 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 DUS1LQ6P1R4 473 aaKnown RBP7.03□□□□□ -1.28
CHD3-213ENST00000571249 SCARA5Q6ZMJ2 495 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 DTHD1Q6ZMT9 781 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 BIVMQ86UB2 503 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 PIM3Q86V86 326 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 FAM129CQ86XR2 697 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 WDR49Q8IV35 697 aa7.03□□□□□ -1.28
CHD3-213ENST00000571249 CCDC117Q8IWD4 279 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms