RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ENTPD3O75355 529 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 WDHD1O75717 1129 aaPredicted RBP4.42□□□□□ -1.7
NUP88-202ENST00000570937 OAZ2O95190 189 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 EPN2O95208 641 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBC1D3HP0C7X1 549 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 ALDH7A1P49419 539 aaKnown RBP4.42□□□□□ -1.7
NUP88-202ENST00000570937 POLGP54098 1239 aaPredicted RBP4.42□□□□□ -1.7
NUP88-202ENST00000570937 ADPRHP54922 357 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 ICA1Q05084 483 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 MORC3Q14149 939 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 SMTNL2Q2TAL5 461 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 BTBD16Q32M84 506 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBRG1Q3YBR2 411 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 PIK3CD-AS1Q5SR53 167 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 ATPAF1Q5TC12 328 aaPredicted RBP4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBC1D3GQ6DHY5 549 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBC1D3CQ6IPX1 549 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 ZSCAN25Q6NSZ9 544 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 CDC42EP5Q6NZY7 148 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 NFRKBQ6P4R8 1299 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 RINLQ6ZS11 566 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 RTL10Q7L3V2 364 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 SLC44A2Q8IWA5 706 aaPredicted RBP4.42□□□□□ -1.7
NUP88-202ENST00000570937 DDIASQ8IXT1 998 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBC1D3Q8IZP1 549 aaPredicted RBP4.42□□□□□ -1.7
NUP88-202ENST00000570937 SPICE1Q8N0Z3 855 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 HMGB4Q8WW32 186 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 FAM151AQ8WW52 585 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 GCC1Q96CN9 775 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 CRB3Q9BUF7 120 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 DCTPP1Q9H773 170 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 IL21RQ9HBE5 538 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 IL1RAPL2Q9NP60 686 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 PRDM8Q9NQV8 689 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 ECHDC1Q9NTX5 307 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 DECR2Q9NUI1 292 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 COPG1Q9Y678 874 aaKnown RBP4.42□□□□□ -1.7
NUP88-202ENST00000570937 DPPA5A6NC42 116 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 KCNJ18B7U540 433 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 IDH1O75874 414 aaKnown RBP4.41□□□□□ -1.7
NUP88-202ENST00000570937 ACTL6BO94805 426 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 BTDP43251 543 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 CTCFP49711 727 aaPredicted RBP4.41□□□□□ -1.7
NUP88-202ENST00000570937 PNLIPRP1P54315 467 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 LINC00205P59089 165 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 SREBF2Q12772 1141 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 FOXO1Q12778 655 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 TCP10Q12799 353 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 PRKG1Q13976 671 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 BRD3Q15059 726 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 INPP5JQ15735 1006 aaPredicted RBP4.41□□□□□ -1.7
NUP88-202ENST00000570937 MANEAQ5SRI9 462 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 TTC22Q5TAA0 569 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 ASPHD1Q5U4P2 390 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 TANGO2Q6ICL3 276 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 LIN54Q6MZP7 749 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 DLK2Q6UY11 383 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 COLCA1Q6ZS62 124 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 RAB11FIP2Q7L804 512 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 MDGA2Q7Z553 956 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 NSMCE1Q8WV22 266 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 NSUN4Q96CB9 384 aaKnown RBP4.41□□□□□ -1.7
NUP88-202ENST00000570937 RMDN3Q96TC7 470 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 IDI2Q9BXS1 227 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 TMEM39BQ9GZU3 492 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 PABPC3Q9H361 631 aaKnown RBP4.41□□□□□ -1.7
NUP88-202ENST00000570937 UTS2RQ9UKP6 389 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 DAPP1Q9UN19 280 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 LAMP3Q9UQV4 416 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 PCDHAC2Q9Y5I4 1007 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 PSME4Q14997 1843 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 MROH7-TTC4A0A0A0MT08 1334 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 GAKO14976 1311 aa4.41□□□□□ -1.7
NUP88-202ENST00000570937 A0A1W2PPC1 479 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 CD8B2A6NJW9 211 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 MCIDASD6RGH6 385 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 PROB1E7EW31 1015 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 INSIG1O15503 277 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 NDUFB8O95169 186 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 CSTBP04080 98 aaKnown RBP4.4□□□□□ -1.71
NUP88-202ENST00000570937 HSPA1AP0DMV8 641 aaKnown RBP4.4□□□□□ -1.71
NUP88-202ENST00000570937 HSPA1BP0DMV9 641 aaKnown RBP4.4□□□□□ -1.71
NUP88-202ENST00000570937 PEPDP12955 493 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 TBXAS1P24557 533 aaPredicted RBP4.4□□□□□ -1.71
NUP88-202ENST00000570937 AP2B1P63010 937 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 KRT72Q14CN4 511 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 SLC9C2Q5TAH2 1124 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 ANKRD45Q5TZF3 282 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 ERAP2Q6P179 960 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 C1orf228Q6PIY5 440 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 MYLK4Q86YV6 388 aaPredicted RBP4.4□□□□□ -1.71
NUP88-202ENST00000570937 FOXP4Q8IVH2 680 aaPredicted RBP4.4□□□□□ -1.71
NUP88-202ENST00000570937 TEX11Q8IYF3 940 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 SCAMP5Q8TAC9 235 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 STT3BQ8TCJ2 826 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 SLC2A12Q8TD20 617 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 CLEC4CQ8WTT0 213 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 EME1Q96AY2 570 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 WACQ9BTA9 647 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 TMEM120AQ9BXJ8 343 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms