RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SEC31AO94979 1220 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 KLF8O95600 359 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 PEX11BO96011 259 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 MT-CO1P00395 513 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 CPP00450 1065 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 EGFP01133 1207 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 AVPP01185 164 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 PRNPP04156 253 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TUBBP07437 444 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 HOXB2P14652 356 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ITIH2P19823 946 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TPSB2P20231 275 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 XPAP23025 273 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 PTGIRP43119 386 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 RPL21P46778 160 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 GALK1P51570 392 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 CCNHP51946 323 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ITGA8P53708 1063 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ARL4CP56559 192 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 SEMA5AQ13591 1074 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ELAVL3Q14576 367 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 MORF4L2Q15014 288 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TPSAB1Q15661 275 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ELF2Q15723 593 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 SLC14A2Q15849 920 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 HNRNPA1L2Q32P51 320 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 MAP9Q49MG5 647 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 HSF5Q4G112 596 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 C2orf27AQ580R0 203 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 CARD16Q5EG05 197 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 DNAJC21Q5F1R6 531 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TMEM196Q5HYL7 178 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 DGKKQ5KSL6 1271 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 EOGTQ5NDL2 527 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 SYCP2LQ5T4T6 812 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ATXN7L2Q5T6C5 722 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TMEM215Q68D42 235 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ALG1LQ6GMV1 187 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 FSTL4Q6MZW2 842 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TXNDC11Q6PKC3 985 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 CEP128Q6ZU80 1094 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 PRUNE1Q86TP1 453 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 HOOK3Q86VS8 718 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 CCDC116Q8IYX3 515 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TEX26Q8N6G2 289 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 GPR161Q8N6U8 529 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 DNAAF3Q8N9W5 541 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 GLIS1Q8NBF1 620 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 OR6K2Q8NGY2 324 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 PDCD6IPQ8WUM4 868 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 CCDC97Q96F63 343 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TUBGCP5Q96RT8 1024 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 RBM15Q96T37 977 aaKnown RBP eCLIP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 UHRF1Q96T88 793 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TBL1YQ9BQ87 522 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 FICDQ9BVA6 458 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 OSBPL1AQ9BXW6 950 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ADGRE3Q9BY15 652 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 FRMD8Q9BZ67 464 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 FBRSQ9HAH7 460 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 EPB41L5Q9HCM4 733 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 XAB2Q9HCS7 855 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 EIF2B3Q9NR50 452 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ARGLU1Q9NWB6 273 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 CACNA2D2Q9NY47 1150 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 WHRNQ9P202 907 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 THAP10Q9P2Z0 257 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 HECAQ9UBI9 543 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 LHX3Q9UBR4 397 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 WNT16Q9UBV4 365 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 SUN2Q9UH99 717 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 IL36AQ9UHA7 158 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ANAPC5Q9UJX4 755 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TPX2Q9ULW0 747 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ATP8A1Q9Y2Q0 1164 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 SNX24Q9Y343 169 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 STON1Q9Y6Q2 735 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 MYO7AQ13402 2215 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 UQCRHLA0A096LP55 91 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 A0A1W2PQ67 120 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 KANSL1LA0AUZ9 987 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 GOLGA8MH3BSY2 632 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 KPNA3O00505 521 aaPredicted RBP6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 MUSKO15146 869 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 ALOX15BO15296 676 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 LILRA1O75019 489 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 ATG13O75143 517 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 SOCS5O75159 536 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 PIGNO95427 931 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 METTL18O95568 372 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 POP4O95707 220 aaKnown RBP6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 AP2A1O95782 977 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 MT-CYBP00156 380 aaPredicted RBP6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 UQCRHP07919 91 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 BMP1P13497 986 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 HLA-EP13747 358 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 HNRNPLP14866 589 aaKnown RBP eCLIP6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 HLA-DPA1P20036 260 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 CD72P21854 359 aa6.65□□□□□ -1.34
CTDNEP1-204ENST00000570484 PRKCHP24723 683 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms