RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ZNF653Q96CK0 615 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ZNF641Q96N77 438 aaPredicted RBP17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TUBGCP5Q96RT8 1024 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 MYOCQ99972 504 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CALN1Q9BXU9 219 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 DHX35Q9H5Z1 703 aaKnown RBP17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CCDC86Q9H6F5 360 aaKnown RBP17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 USP29Q9HBJ7 922 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 LRP4O75096 1905 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 IGLON5A6NGN9 336 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 FPGTO14772 594 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CSF2P04141 144 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 NME1P15531 152 aaKnown RBP17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 HNF1BP35680 557 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CLDN2P57739 230 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 HNRNPKP61978 463 aaKnown RBP eCLIP17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 DPYSQ14117 519 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 FZD2Q14332 565 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 RFTN1Q14699 578 aaPredicted RBP17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 AGERQ15109 404 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 DPYSL2Q16555 572 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TMEM52BQ4KMG9 183 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 LEKR1Q6ZMV7 388 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 LUZP1Q86V48 1076 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PARGQ86W56 976 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ZNF354CQ86Y25 554 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ARHGAP12Q8IWW6 846 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 NIPA2Q8N8Q9 360 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 FAM181AQ8N9Y4 354 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SPOCK2Q92563 424 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TBATAQ96M53 351 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 KCTD15Q96SI1 283 aaPredicted RBP17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TRIM7Q9C029 511 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SLC39A8Q9C0K1 460 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 GPATCH2LQ9NWQ4 482 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 NLGN3Q9NZ94 848 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 GGT7Q9UJ14 662 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CAPN11Q9UMQ6 739 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CSNK1G3Q9Y6M4 447 aa17.29■□□□□ 0.36
MAP1LC3B-208ENST00000570189 LAMA5O15230 3695 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 NEMP2A6NFY4 417 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 GOLGA8CPA6NN73 597 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TRIM38O00635 465 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 NEMP1O14524 444 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SERPING1P05155 500 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SKILP12757 684 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TIMP2P16035 220 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ERCC2P18074 760 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 YPEL5P62699 121 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ZBED6P86452 979 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 NSUN2Q08J23 767 aaKnown RBP eCLIP17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ELP6Q0PNE2 266 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 BOLA3Q53S33 107 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 BRAT1Q6PJG6 821 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PTAR1Q7Z6K3 402 aaPredicted RBP17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TTC7BQ86TV6 843 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ZNF599Q96NL3 588 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 DUSP23Q9BVJ7 150 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 C1QTNF7Q9BXJ2 289 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PCSK1NQ9UHG2 260 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ITM2BQ9Y287 266 aa17.28■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ADAMTS20P59510 1910 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 J3KR12 359 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SCAMP1O15126 338 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SIGLEC6O43699 453 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SDC3O75056 442 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CKMT1AP12532 417 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PAPOLAP51003 745 aaKnown RBP17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 UBASH3AP57075 661 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 E2F1Q01094 437 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 IL10RBQ08334 325 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PIGHQ14442 188 aaPredicted RBP17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TMCO4Q5TGY1 634 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 VPS36Q86VN1 386 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TEKT4Q8WW24 435 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SUV39H2Q9H5I1 410 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ZWILCHQ9H900 591 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 UCKL1Q9NWZ5 548 aa17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CWC15Q9P013 229 aaKnown RBP17.27■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CFAP69A5D8W1 941 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TRABD2BA6NFA1 517 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 H3BM21 787 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 LZTS3O60299 673 aaPredicted RBP17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TM7SF2O76062 418 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 GP1BAP07359 652 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ALPPL2P10696 532 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 HNRNPH3P31942 346 aaKnown RBP17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 PTK2BQ14289 1009 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 UGP2Q16851 508 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 HS1BP3Q53T59 392 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TDRD12Q587J7 1177 aaKnown RBP17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 NPWQ8N729 165 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TP53I13Q8NBR0 393 aaPredicted RBP17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 CXorf40AQ8TE69 158 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 BTN2A2Q8WVV5 523 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ECHDC3Q96DC8 303 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 CELF6Q96J87 481 aaKnown RBP17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 DNAJC28Q9NX36 388 aa17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 NENFQ9UMX5 172 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms