RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 CCDC68Q9H2F9 335 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 NELFAQ9H3P2 528 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 NDST4Q9H3R1 872 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 CHODLQ9H9P2 273 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 UNKLQ9H9P5 680 aaKnown RBP7.44□□□□□ -1.22
CNOT1-222ENST00000570139 AGPAT3Q9NRZ7 376 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 KRT84Q9NSB2 600 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 NTMQ9P121 344 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 CLCA2Q9UQC9 943 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 NR2E1Q9Y466 385 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.44□□□□□ -1.22
CNOT1-222ENST00000570139 NRCAMQ92823 1304 aa7.44□□□□□ -1.22
CNOT1-222ENST00000570139 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-222ENST00000570139 GTPBP10A4D1E9 387 aaKnown RBP7.43□□□□□ -1.22
CNOT1-222ENST00000570139 TMEM150BA6NC51 233 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 J3KTA2 159 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 K7ERI5 159 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 SLC16A4O15374 487 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 P4HA2O15460 535 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 TGFB1I1O43294 461 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 N4BP1O75113 896 aaKnown RBP7.43□□□□□ -1.22
CNOT1-222ENST00000570139 KRT38O76015 456 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 C22orf31O95567 290 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 KRT13P13646 458 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 SERPINA4P29622 427 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 HOXD13P35453 343 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 CDK7P50613 346 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 MAP2K1Q02750 393 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-222ENST00000570139 CETN1Q12798 172 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 ACAP1Q15027 740 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 BTBD16Q32M84 506 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 CTXN3Q4LDR2 81 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 HSP90AA4PQ58FG1 418 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 ARMCX5Q6P1M9 558 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 CCDC186Q7Z3E2 898 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-222ENST00000570139 ZNF410Q86VK4 478 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 ARMC8Q8IUR7 673 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 XXYLT1Q8NBI6 393 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 SPC24Q8NBT2 197 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 ZNF397Q8NF99 534 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-222ENST00000570139 BPIFB1Q8TDL5 484 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 NAP1L5Q96NT1 182 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-222ENST00000570139 PANX2Q96RD6 677 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 MAP7D2Q96T17 732 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 SEZ6LQ9BYH1 1024 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 VPS16Q9H269 839 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 EPB41L4BQ9H329 900 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 MSL2Q9HCI7 577 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 TMLHEQ9NVH6 421 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 PRMT7Q9NVM4 692 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-222ENST00000570139 INTS13Q9NVM9 706 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 DMAC2Q9NW81 257 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 RNF186Q9NXI6 227 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 TAB2Q9NYJ8 693 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 FLRT1Q9NZU1 646 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 DNAJB11Q9UBS4 358 aa7.43□□□□□ -1.22
CNOT1-222ENST00000570139 MYOCOSA0A1B0GUC4 107 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 UBE2QL1A1L167 161 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 LRRIQ4A6NIV6 560 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 PRR5-ARHGAP8B1AHC4 643 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 AKR1B15C9JRZ8 316 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-222ENST00000570139 PES1O00541 588 aaKnown RBP7.42□□□□□ -1.22
CNOT1-222ENST00000570139 ZSCAN9O15535 394 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-222ENST00000570139 EXOC3O60645 756 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 VPS4BO75351 444 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 TIPRLO75663 272 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 CABYRO75952 493 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 AFPP02771 609 aaKnown RBP7.42□□□□□ -1.22
CNOT1-222ENST00000570139 INSRRP14616 1297 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 GLRA2P23416 452 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 MARK3P27448 753 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 PXNP49023 591 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-222ENST00000570139 LIG4P49917 911 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 EPHB3P54753 998 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 ARF3P61204 181 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-222ENST00000570139 ARF1P84077 181 aaKnown RBP7.42□□□□□ -1.22
CNOT1-222ENST00000570139 PRKCZQ05513 592 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 LAMTOR4Q0VGL1 99 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 CAPSQ13938 189 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 CCL14Q16627 93 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 MAPK6Q16659 721 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 KYAT1Q16773 422 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 FAM187BQ17R55 369 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 ZC2HC1CQ53FD0 456 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-222ENST00000570139 MIIPQ5JXC2 388 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 UBXN11Q5T124 520 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 FAM205BPQ63HN1 556 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 ANKS6Q68DC2 871 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 ABLIM2Q6H8Q1 611 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 GALNT5Q7Z7M9 940 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 CREBRFQ8IUR6 639 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 LRRC8AQ8IWT6 810 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 SPARTQ8N0X7 666 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 LINC01465Q8N7H1 131 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 RAET1EQ8TD07 263 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 TRIB2Q92519 343 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 BICD1Q96G01 975 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 ZDHHC12Q96GR4 267 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms