RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 CDYLQ9Y232 598 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 DRG1Q9Y295 367 aaKnown RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 KCNE2Q9Y6J6 123 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 FAM169AQ9Y6X4 670 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TCF20Q9UGU0 1960 aaKnown RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TTC41PQ6P2S7 1318 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 RAD50Q92878 1312 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TANC1Q9C0D5 1861 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 SCN5AQ14524 2016 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 CCDC195A0A1B0GUA6 201 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 A0A1W2PQM1 296 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 UBE2QL1A1L167 161 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 EPOPA6NHQ4 379 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 AGAP5A6NIR3 686 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 DRGXA6NNA5 263 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 M0QYT0 321 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 BCAT2O15382 392 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 ADAM20O43506 726 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 LPXNO60711 386 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 STC2O76061 302 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 TGDSO95455 350 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 CXCL10P02778 98 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 KRT1P04264 644 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 EIF2S1P05198 315 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 URODP06132 367 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 PTMAP06454 111 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 IQCF3P0C7M6 154 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 SPATA31D3P0C874 917 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 ACP5P13686 325 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 COX7A2P14406 83 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 EPHA3P29320 983 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 ATP5DP30049 168 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 CD6P30203 668 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 PPIFP30405 207 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 CSF2RBP32927 897 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 ICAM3P32942 547 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 THBS4P35443 961 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 GARSP41250 739 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 PCP4P48539 62 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 MRPL12P52815 198 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 PPP5CP53041 499 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 EIF3BP55884 814 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 FAM3BP58499 235 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 UFM1P61960 85 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 TFF2Q03403 129 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 TAP1Q03518 808 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 RNASELQ05823 741 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 BFSP1Q12934 665 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 MTAPQ13126 283 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 EIF2B5Q13144 721 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 NFYCQ13952 458 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 BAATQ14032 418 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 CRYMQ14894 314 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 MED22Q15528 200 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 ALX1Q15699 326 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 FAM214AQ32MH5 1076 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 RAB41Q5JT25 222 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 TMEM31Q5JXX7 168 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 NKAPLQ5M9Q1 402 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 TMEM63BQ5T3F8 832 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 KAZNQ674X7 775 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 SFRP4Q6FHJ7 346 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 CCDC144NLQ6NUI1 221 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 EFCAB12Q6NXP0 572 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 DRICH1Q6PGQ1 229 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 NCEH1Q6PIU2 408 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 SPATA31D4Q6ZUB0 917 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 DEFB128Q7Z7B8 93 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 DTX1Q86Y01 620 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 CEP97Q8IW35 865 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 SLC15A3Q8IY34 581 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 AGBL5Q8NDL9 886 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 NSUN7Q8NE18 718 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 TET1Q8NFU7 2136 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 OR6J1Q8NGC5 347 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 CAGE1Q8TC20 777 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 NOC3LQ8WTT2 800 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 POMGNT1Q8WZA1 660 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 ARHGEF2Q92974 986 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 ARRDC3Q96B67 414 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 PERPQ96FX8 193 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF845Q96IR2 970 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 FAR2Q96K12 515 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 C5orf34Q96MH7 638 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 YTHDC1Q96MU7 727 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 EIF3CQ99613 913 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 NPAS1Q99742 590 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 TCF25Q9BQ70 676 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 GPATCH1Q9BRR8 931 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 TEX12Q9BXU0 123 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 NDST4Q9H3R1 872 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 SMOC2Q9H3U7 446 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 SLC35C2Q9NQQ7 365 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 IL17RBQ9NRM6 502 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 TCP11L1Q9NUJ3 509 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 SIRT5Q9NXA8 310 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 VSX1Q9NZR4 365 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 MRPL15Q9P015 296 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 SUCLA2Q9P2R7 463 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms