RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 CCDC187A0A096LP49 1063 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 EFSO43281 561 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 TSPAN6O43657 245 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 TMCC1O94876 653 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 PIGNO95427 931 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 F9P00740 461 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 PRKCGP05129 697 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 EIF4A3P38919 411 aaKnown RBP12.23□□□□□ -0.45
CAPN3-220ENST00000569827 SNX16P57768 344 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 CCL7P80098 99 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 NFATC3Q12968 1075 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 KLHL40Q2TBA0 621 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 MANEALQ5VSG8 457 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 BNIPLQ7Z465 357 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 TTC7BQ86TV6 843 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 NLRP14Q86W24 1093 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 ZDHHC17Q8IUH5 632 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 CCDC185Q8N715 623 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 EXD3Q8N9H8 876 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 TP53I13Q8NBR0 393 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-220ENST00000569827 DENND6BQ8NEG7 585 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 OR2AP1Q8NGE2 309 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 JOSD2Q8TAC2 188 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 FAM174AQ8TBP5 190 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 GPT2Q8TD30 523 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 MED8Q96G25 268 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 LENG8Q96PV6 779 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-220ENST00000569827 HAPLN3Q96S86 360 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 EPAS1Q99814 870 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.23□□□□□ -0.45
CAPN3-220ENST00000569827 PADI4Q9UM07 663 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 NEU3Q9UQ49 428 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 PAXBP1Q9Y5B6 917 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 PCDHGA8Q9Y5G5 932 aa12.23□□□□□ -0.45
CAPN3-220ENST00000569827 FLNCQ14315 2725 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 GTPBP10A4D1E9 387 aaKnown RBP12.22□□□□□ -0.45
CAPN3-220ENST00000569827 LMO7DNF2Z398 122 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 PES1O00541 588 aaKnown RBP12.22□□□□□ -0.45
CAPN3-220ENST00000569827 TPP1O14773 563 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 AREL1O15033 823 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 TM7SF2O76062 418 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 LRIG2O94898 1065 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 PRKCSHP14314 528 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-220ENST00000569827 ITIH1P19827 911 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 SLC5A2P31639 672 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 NOMO3P69849 1222 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 PPARDQ03181 441 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 SLC20A2Q08357 652 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 MAN2A1Q16706 1144 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 TPD52L1Q16890 204 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-220ENST00000569827 ALG11Q2TAA5 492 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 MYLK3Q32MK0 819 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 MIIPQ5JXC2 388 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 IGF2-ASQ6U949 168 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 GDPD4Q6W3E5 623 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 ZNF783Q6ZMS7 281 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 VASH2Q86V25 355 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 PYROXD2Q8N2H3 581 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 ARL14Q8N4G2 192 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 Q8N9G6 341 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-220ENST00000569827 CXorf40AQ8TE69 158 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 SNRNP27Q8WVK2 155 aaKnown RBP12.22□□□□□ -0.45
CAPN3-220ENST00000569827 RXFP2Q8WXD0 754 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 EXTL1Q92935 676 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 WBP1Q96G27 269 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 CPEB1Q9BZB8 566 aaKnown RBP12.22□□□□□ -0.45
CAPN3-220ENST00000569827 SLC13A1Q9BZW2 595 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 CLMPQ9H6B4 373 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 OR12D3Q9UGF7 316 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 ATXN7L1Q9ULK2 861 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-220ENST00000569827 DOLKQ9UPQ8 538 aa12.22□□□□□ -0.45
CAPN3-220ENST00000569827 A0A1W2PQM1 296 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 D6RAR5 112 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 PLD2O14939 933 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 BUB1O43683 1085 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 TCEA3O75764 348 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 GSRP00390 522 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 PCCBP05166 539 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 RPLP0P05388 317 aaKnown RBP12.21□□□□□ -0.45
CAPN3-220ENST00000569827 TIMP2P16035 220 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 UGT1A5P35504 534 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 SNRPD1P62314 119 aaKnown RBP12.21□□□□□ -0.45
CAPN3-220ENST00000569827 PTK2BQ14289 1009 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 POLD3Q15054 466 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-220ENST00000569827 CCDC14Q49A88 953 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 ESRP1Q6NXG1 681 aaKnown RBP12.21□□□□□ -0.45
CAPN3-220ENST00000569827 ENPP7Q6UWV6 458 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 MACC1Q6ZN28 852 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 CLEC14AQ86T13 490 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 FBXO39Q8N4B4 442 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 TPCN2Q8NHX9 752 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 SLC30A5Q8TAD4 765 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 BTN2A2Q8WVV5 523 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 GLMNQ92990 594 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 NAT6Q93015 286 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 RAB7BQ96AH8 199 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 ISG20Q96AZ6 181 aaKnown RBP12.21□□□□□ -0.45
CAPN3-220ENST00000569827 PDXPQ96GD0 296 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 CCNL2Q96S94 520 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms