RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 PHF13Q86YI8 300 aaPredicted RBP13.84□□□□□ -0.19
CNOT1-215ENST00000569020 SPACA3Q8IXA5 215 aa13.84□□□□□ -0.19
CNOT1-215ENST00000569020 RTL3Q8N8U3 475 aaKnown RBP13.84□□□□□ -0.19
CNOT1-215ENST00000569020 LSM14AQ8ND56 463 aaKnown RBP13.84□□□□□ -0.19
CNOT1-215ENST00000569020 C3orf20Q8ND61 904 aa13.84□□□□□ -0.19
CNOT1-215ENST00000569020 ANKRD20A12PQ8NF67 263 aa13.84□□□□□ -0.19
CNOT1-215ENST00000569020 NEK11Q8NG66 645 aa13.84□□□□□ -0.19
CNOT1-215ENST00000569020 TPCN2Q8NHX9 752 aa13.84□□□□□ -0.19
CNOT1-215ENST00000569020 CENPTQ96BT3 561 aa13.84□□□□□ -0.19
CNOT1-215ENST00000569020 PCDHB18PQ96TA0 734 aa13.84□□□□□ -0.19
CNOT1-215ENST00000569020 CATSPERBQ9H7T0 1116 aa13.84□□□□□ -0.19
CNOT1-215ENST00000569020 POLR1BQ9H9Y6 1135 aa13.84□□□□□ -0.19
CNOT1-215ENST00000569020 SIGLEC16A6NMB1 481 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 CREB3O43889 395 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 MMP20O60882 483 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 DXOO77932 396 aaKnown RBP13.83□□□□□ -0.2
CNOT1-215ENST00000569020 DESP17661 470 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 TGM2P21980 687 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 XPAP23025 273 aaPredicted RBP13.83□□□□□ -0.2
CNOT1-215ENST00000569020 IGFALSP35858 605 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 LSSP48449 732 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 RPIAP49247 311 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 AIF1P55008 147 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 YBEYP58557 167 aaPredicted RBP13.83□□□□□ -0.2
CNOT1-215ENST00000569020 ERVPABLB-1P60509 514 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 NR0B2Q15466 257 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 ISXQ2M1V0 245 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 LRRC73Q5JTD7 316 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 TPRG1LQ5T0D9 272 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 GUSBP11Q6P575 273 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 EFL1Q7Z2Z2 1120 aaKnown RBP13.83□□□□□ -0.2
CNOT1-215ENST00000569020 VPS36Q86VN1 386 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 PHACTR4Q8IZ21 702 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 RBFAQ8N0V3 343 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 PYROXD2Q8N2H3 581 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 GRAMD1AQ96CP6 724 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 NAF1Q96HR8 494 aaKnown RBP13.83□□□□□ -0.2
CNOT1-215ENST00000569020 TBATAQ96M53 351 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 NCAPGQ9BPX3 1015 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 SLC13A1Q9BZW2 595 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 FANCLQ9NW38 375 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 SIK3Q9Y2K2 1263 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 MFHAS1Q9Y4C4 1052 aa13.83□□□□□ -0.2
CNOT1-215ENST00000569020 LRP4O75096 1905 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 CCP110O43303 1012 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 LZTS3O60299 673 aaPredicted RBP13.82□□□□□ -0.2
CNOT1-215ENST00000569020 ANXA6P08133 673 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 EIF4A3P38919 411 aaKnown RBP13.82□□□□□ -0.2
CNOT1-215ENST00000569020 SUOXP51687 545 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 ZNF143P52747 638 aaPredicted RBP13.82□□□□□ -0.2
CNOT1-215ENST00000569020 COPB1P53618 953 aaKnown RBP13.82□□□□□ -0.2
CNOT1-215ENST00000569020 ADKP55263 362 aaKnown RBP13.82□□□□□ -0.2
CNOT1-215ENST00000569020 PPARDQ03181 441 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 ELP6Q0PNE2 266 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 GRM3Q14832 879 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 KLHL40Q2TBA0 621 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 PARP15Q460N3 678 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 PRRT3Q5FWE3 981 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 C3orf38Q5JPI3 329 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 C6orf132Q5T0Z8 1188 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 FAXCQ5TGI0 409 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 DNAJC24Q6P3W2 148 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 MACC1Q6ZN28 852 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 VOPP1Q96AW1 172 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 EPAS1Q99814 870 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 BOCQ9BWV1 1114 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 CPEB1Q9BZB8 566 aaKnown RBP13.82□□□□□ -0.2
CNOT1-215ENST00000569020 NOL6Q9H6R4 1146 aaKnown RBP13.82□□□□□ -0.2
CNOT1-215ENST00000569020 THSD1Q9NS62 852 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 DKK3Q9UBP4 350 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 FZD10Q9ULW2 581 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 DOLKQ9UPQ8 538 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 SATB2Q9UPW6 733 aa13.82□□□□□ -0.2
CNOT1-215ENST00000569020 WASH4PA8MWX3 477 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 RASA4BC9J798 803 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 MUSKO15146 869 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 FGF10O15520 208 aaPredicted RBP13.81□□□□□ -0.2
CNOT1-215ENST00000569020 RASA4O43374 803 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 TCEA3O75764 348 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 PRB1P04280 392 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 RBMS1P29558 406 aaKnown RBP13.81□□□□□ -0.2
CNOT1-215ENST00000569020 BLKP51451 505 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 UCNP55089 124 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 TMPRSS3P57727 454 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 SERINC3Q13530 473 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 C1orf61Q13536 156 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 ESRP1Q6NXG1 681 aaKnown RBP13.81□□□□□ -0.2
CNOT1-215ENST00000569020 CRTC1Q6UUV9 634 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 RBM44Q6ZP01 1051 aaKnown RBP13.81□□□□□ -0.2
CNOT1-215ENST00000569020 MON1BQ7L1V2 547 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 DNAAF5Q86Y56 855 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 TP53I13Q8NBR0 393 aaPredicted RBP13.81□□□□□ -0.2
CNOT1-215ENST00000569020 WDR48Q8TAF3 677 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 KCNE4Q8WWG9 221 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 NAT6Q93015 286 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 HMCESQ96FZ2 354 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 HIC2Q96JB3 615 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 MCEEQ96PE7 176 aa13.81□□□□□ -0.2
CNOT1-215ENST00000569020 AGPAT1Q99943 283 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms