RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 GPR34Q9UPC5 381 aa12.65□□□□□ -0.38
SNX29-207ENST00000568949 ITM2BQ9Y287 266 aa12.65□□□□□ -0.38
SNX29-207ENST00000568949 SNX10Q9Y5X0 201 aa12.65□□□□□ -0.38
SNX29-207ENST00000568949 CLEC18AA5D8T8 446 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.64□□□□□ -0.39
SNX29-207ENST00000568949 TM7SF2O76062 418 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 RASGRP1O95267 797 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 SMC2O95347 1197 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 CD160O95971 181 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 ERBB2P04626 1255 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 CTSEP14091 401 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 ITIH1P19827 911 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 GNA12Q03113 381 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 SERINC3Q13530 473 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 CLCA4Q14CN2 919 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 ARTNQ5T4W7 220 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 FOXR2Q6PJQ5 311 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 CLEC18BQ6UXF7 455 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 GKN2Q86XP6 184 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 ZDHHC17Q8IUH5 632 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 CCNJLQ8IV13 435 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 HSCBQ8IWL3 235 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 TP53I13Q8NBR0 393 aaPredicted RBP12.64□□□□□ -0.39
SNX29-207ENST00000568949 CLEC18CQ8NCF0 446 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 C1orf131Q8NDD1 294 aaKnown RBP12.64□□□□□ -0.39
SNX29-207ENST00000568949 GPR156Q8NFN8 814 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 USP7Q93009 1102 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 NT5C3BQ969T7 300 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 FAM81BQ96LP2 452 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 CMKLR1Q99788 373 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 TM6SF2Q9BZW4 377 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 MBNL1Q9NR56 388 aaKnown RBP12.64□□□□□ -0.39
SNX29-207ENST00000568949 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNX29-207ENST00000568949 FOXJ2Q9P0K8 574 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 APPL1Q9UKG1 709 aa12.64□□□□□ -0.39
SNX29-207ENST00000568949 USP9YO00507 2555 aaPredicted RBP12.64□□□□□ -0.39
SNX29-207ENST00000568949 CHD5Q8TDI0 1954 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 NOTCH2Q04721 2471 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 BECN2A8MW95 431 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 C9orf172C9J069 976 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 MMP20O60882 483 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 POP4O95707 220 aaKnown RBP12.63□□□□□ -0.39
SNX29-207ENST00000568949 GSRP00390 522 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 PNLIPP16233 465 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 TFE3P19532 575 aaPredicted RBP12.63□□□□□ -0.39
SNX29-207ENST00000568949 CR2P20023 1033 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 HTR1BP28222 390 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 GKP32189 559 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 ETFBP38117 255 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 ETV5P41161 510 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 PPP1R2P41236 205 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 SULT1E1P49888 294 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 GEMIN4P57678 1058 aaKnown RBP12.63□□□□□ -0.39
SNX29-207ENST00000568949 SNRPD1P62314 119 aaKnown RBP12.63□□□□□ -0.39
SNX29-207ENST00000568949 CYP4F2P78329 520 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 DEUP1Q05D60 604 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 ALG11Q2TAA5 492 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 SMYD5Q6GMV2 418 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 TTI2Q6NXR4 508 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 HID1Q8IV36 788 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 TRIM59Q8IWR1 403 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 RYBPQ8N488 228 aaPredicted RBP12.63□□□□□ -0.39
SNX29-207ENST00000568949 OR2AP1Q8NGE2 309 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 SMARCE1Q969G3 411 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 HAPLN3Q96S86 360 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 EPAS1Q99814 870 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 ZYG11BQ9C0D3 744 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 TUBD1Q9UJT1 453 aa12.63□□□□□ -0.39
SNX29-207ENST00000568949 LRP4O75096 1905 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 LRRK1Q38SD2 2015 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 BSNQ9UPA5 3926 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 SPTBN1Q01082 2364 aaKnown RBP12.62□□□□□ -0.39
SNX29-207ENST00000568949 KRIT1O00522 736 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 SRGAP2O75044 1071 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 GNA14O95837 355 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 UGT2B4P06133 528 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 GLB1P16278 677 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 MARSP56192 900 aaKnown RBP12.62□□□□□ -0.39
SNX29-207ENST00000568949 FOXK1P85037 733 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 POLD3Q15054 466 aaPredicted RBP12.62□□□□□ -0.39
SNX29-207ENST00000568949 IRF4Q15306 451 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 KLHL40Q2TBA0 621 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 MYLK3Q32MK0 819 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 SLC25A52Q3SY17 297 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 TMEM164Q5U3C3 297 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 BORAQ6PGQ7 559 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 OGFOD3Q6PK18 319 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 TTC7BQ86TV6 843 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 PASD1Q8IV76 773 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 SLITRK4Q8IW52 837 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 FMR1NBQ8N0W7 255 aaPredicted RBP12.62□□□□□ -0.39
SNX29-207ENST00000568949 OR6K2Q8NGY2 324 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 ATL2Q8NHH9 583 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 CXorf40AQ8TE69 158 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 ARHGEF2Q92974 986 aaKnown RBP12.62□□□□□ -0.39
SNX29-207ENST00000568949 TSACCQ96A04 125 aaPredicted RBP12.62□□□□□ -0.39
SNX29-207ENST00000568949 VOPP1Q96AW1 172 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 KLHL32Q96NJ5 620 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 SLC12A9Q9BXP2 914 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 EPN3Q9H201 632 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms