RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 TADA1Q96BN2 335 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 ZNF669Q96BR6 464 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-221ENST00000567935 APOPT1Q96IL0 206 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 ZFRQ96KR1 1074 aaKnown RBP14.79□□□□□ -0.04
COMMD4-221ENST00000567935 PRICKLE1Q96MT3 831 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-221ENST00000567935 ZNF317Q96PQ6 595 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-221ENST00000567935 RANBP9Q96S59 729 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 CPNE1Q99829 537 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 FICDQ9BVA6 458 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 LRRC3Q9BY71 257 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 PDFQ9HBH1 243 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 NT5MQ9NPB1 228 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 ASAH2Q9NR71 780 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 ZFATQ9P243 1243 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 NCDNQ9UBB6 729 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 SEPT3Q9UH03 358 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 HCFC2Q9Y5Z7 792 aa14.79□□□□□ -0.04
COMMD4-221ENST00000567935 KRBA1A5PL33 1030 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 C2orf71A6NGG8 1288 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 CXorf49A8MYA2 514 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-221ENST00000567935 TRIM49D1C9J1S8 452 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 STK25O00506 426 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 NARSO43776 548 aaKnown RBP14.78□□□□□ -0.04
COMMD4-221ENST00000567935 USP12O75317 370 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 ASMTLO95671 621 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 EPOP01588 193 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 POU2F2P09086 479 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 PAMP19021 973 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 ADRA1DP25100 572 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 HADHAP40939 763 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 CCNFP41002 786 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 CSE1LP55060 971 aaKnown RBP14.78□□□□□ -0.04
COMMD4-221ENST00000567935 OXCT1P55809 520 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 WNT3AP56704 352 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 SLC10A7Q0GE19 358 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 TDGQ13569 410 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 PPM1LQ5SGD2 360 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 RARS2Q5T160 578 aaKnown RBP14.78□□□□□ -0.04
COMMD4-221ENST00000567935 MPP7Q5T2T1 576 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 GRTP1Q5TC63 336 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 PDPK2PQ6A1A2 396 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 PKN3Q6P5Z2 889 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 RFWD3Q6PCD5 774 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 Q6ZNB5 142 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 RGS9BPQ6ZS82 235 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 MICALCLQ6ZW33 695 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 CPLX4Q7Z7G2 160 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 RASSF3Q86WH2 238 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 CIR1Q86X95 450 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-221ENST00000567935 CPXM2Q8N436 756 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 SPATA22Q8NHS9 363 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 RTKNQ9BST9 563 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 ACE2Q9BYF1 805 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-221ENST00000567935 TRPC7Q9HCX4 862 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 ATP13A1Q9HD20 1204 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 SMYD2Q9NRG4 433 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 GKN1Q9NS71 199 aa14.78□□□□□ -0.04
COMMD4-221ENST00000567935 UBA2Q9UBT2 640 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-221ENST00000567935 CXorf51AA0A1B0GTR3 108 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 ZCWPW2A0A1B0GU75 182 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 A0A1W2PPM1 405 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 ERICH4A6NGS2 130 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 GFRA2O00451 464 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 EBAG9O00559 213 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 ATP9BO43861 1147 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 PAPSS2O95340 614 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-221ENST00000567935 MT-CYBP00156 380 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-221ENST00000567935 DCNP07585 359 aaKnown RBP14.77□□□□□ -0.05
COMMD4-221ENST00000567935 IRF1P10914 325 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 HOXD9P28356 352 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-221ENST00000567935 ACVRL1P37023 503 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 SEC24CP53992 1094 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 EPHA5P54756 1037 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 RPS24P62847 133 aaKnown RBP14.77□□□□□ -0.05
COMMD4-221ENST00000567935 CRADDP78560 199 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 MPP2Q14168 576 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 FAM182AQ5T1J6 154 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 CERCAMQ5T4B2 595 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 GKAP1Q5VSY0 366 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-221ENST00000567935 HHATQ5VTY9 493 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 IL31Q6EBC2 164 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 DENND5AQ6IQ26 1287 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 PACS1Q6VY07 963 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 HTR3DQ70Z44 454 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 NLRP9Q7RTR0 991 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 TAX1BP1Q86VP1 789 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 C4orf33Q8N1A6 199 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 CFAP52Q8N1V2 620 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 ARL14EPQ8N8R7 260 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-221ENST00000567935 ZNF419Q96HQ0 510 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-221ENST00000567935 MRGPRX2Q96LB1 330 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 PSKH2Q96QS6 385 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 MGME1Q9BQP7 344 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 UBP1Q9NZI7 540 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 TCAF1Q9Y4C2 921 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 CPQQ9Y646 472 aa14.77□□□□□ -0.05
COMMD4-221ENST00000567935 FASNP49327 2511 aaKnown RBP14.76□□□□□ -0.05
COMMD4-221ENST00000567935 DENND4AQ7Z401 1863 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 HEATR9A2RTY3 570 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 PRR5-ARHGAP8B1AHC4 643 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms