RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 GJB5O95377 273 aa23.51■■□□□ 1.35
LINC00543-201ENST00000567234 CDH4P55283 916 aa23.51■■□□□ 1.35
LINC00543-201ENST00000567234 TAF12Q16514 161 aa23.51■■□□□ 1.35
LINC00543-201ENST00000567234 ZNF354CQ86Y25 554 aa23.51■■□□□ 1.35
LINC00543-201ENST00000567234 MYEOVQ96EZ4 313 aa23.51■■□□□ 1.35
LINC00543-201ENST00000567234 ZNF778Q96MU6 729 aa23.51■■□□□ 1.35
LINC00543-201ENST00000567234 TREX1Q9NSU2 369 aa23.51■■□□□ 1.35
LINC00543-201ENST00000567234 STK39Q9UEW8 545 aa23.51■■□□□ 1.35
LINC00543-201ENST00000567234 PRKAG2Q9UGJ0 569 aa23.51■■□□□ 1.35
LINC00543-201ENST00000567234 LAMA2P24043 3122 aaKnown RBP23.5■■□□□ 1.35
LINC00543-201ENST00000567234 MMP2P08253 660 aa23.5■■□□□ 1.35
LINC00543-201ENST00000567234 SLC6A4P31645 630 aa23.5■■□□□ 1.35
LINC00543-201ENST00000567234 POLD2P49005 469 aa23.5■■□□□ 1.35
LINC00543-201ENST00000567234 COL13A1Q5TAT6 717 aaPredicted RBP23.5■■□□□ 1.35
LINC00543-201ENST00000567234 KIAA0930Q6ICG6 404 aaPredicted RBP23.5■■□□□ 1.35
LINC00543-201ENST00000567234 CIR1Q86X95 450 aaPredicted RBP23.5■■□□□ 1.35
LINC00543-201ENST00000567234 PPFIBP2Q8ND30 876 aa23.5■■□□□ 1.35
LINC00543-201ENST00000567234 KLHL5Q96PQ7 755 aa23.5■■□□□ 1.35
LINC00543-201ENST00000567234 RHOJQ9H4E5 214 aa23.5■■□□□ 1.35
LINC00543-201ENST00000567234 NPHS2Q9NP85 383 aa23.5■■□□□ 1.35
LINC00543-201ENST00000567234 UXTQ9UBK9 157 aaPredicted RBP23.5■■□□□ 1.35
LINC00543-201ENST00000567234 EMCNQ9ULC0 261 aa23.5■■□□□ 1.35
LINC00543-201ENST00000567234 PLIN3O60664 434 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 CCDC22O60826 627 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 ARCN1P48444 511 aaKnown RBP23.49■■□□□ 1.35
LINC00543-201ENST00000567234 ITKQ08881 620 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 N4BP2L1Q5TBK1 243 aaPredicted RBP23.49■■□□□ 1.35
LINC00543-201ENST00000567234 TCEAL8Q8IYN2 117 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 VCX3BQ9H321 246 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 PDFQ9HBH1 243 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 VCX3AQ9NNX9 186 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 HEATR9A2RTY3 570 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 CLDN11O75508 207 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 STC2O76061 302 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 T-ENOLP0DO92 83 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 CDC25CP30307 473 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 PPM1AP35813 382 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 CD86P42081 329 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 SERPINH1P50454 418 aaKnown RBP23.49■■□□□ 1.35
LINC00543-201ENST00000567234 TMPRSS15P98073 1019 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 CDK18Q07002 472 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 CCDC153Q494R4 210 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 ARRDC2Q8TBH0 407 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 NCSTNQ92542 709 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 VPS39Q96JC1 886 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 GPR22Q99680 433 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 DDX50Q9BQ39 737 aaKnown RBP23.49■■□□□ 1.35
LINC00543-201ENST00000567234 MECRQ9BV79 373 aa23.49■■□□□ 1.35
LINC00543-201ENST00000567234 POLR1EQ9GZS1 481 aaKnown RBP23.49■■□□□ 1.35
LINC00543-201ENST00000567234 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.49■■□□□ 1.35
LINC00543-201ENST00000567234 BAIAP3O94812 1187 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 PAPSS2O95340 614 aaPredicted RBP23.48■■□□□ 1.35
LINC00543-201ENST00000567234 GSRP00390 522 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 GM2AP17900 193 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 ACVRL1P37023 503 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 DSC2Q02487 901 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 GNA12Q03113 381 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 BST1Q10588 318 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 LAMB3Q13751 1172 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 CHI3L2Q15782 390 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 ALG1LQ6GMV1 187 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 CHST9Q7L1S5 443 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 ARHGAP22Q7Z5H3 698 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 LCA5Q86VQ0 697 aa23.48■■□□□ 1.35
LINC00543-201ENST00000567234 ZC3HC1Q86WB0 502 aaKnown RBP23.48■■□□□ 1.35
LINC00543-201ENST00000567234 KLF16Q9BXK1 252 aaPredicted RBP23.48■■□□□ 1.35
LINC00543-201ENST00000567234 DENND2DQ9H6A0 471 aaPredicted RBP23.48■■□□□ 1.35
LINC00543-201ENST00000567234 MTO1Q9Y2Z2 717 aaKnown RBP23.48■■□□□ 1.35
LINC00543-201ENST00000567234 SNNO75324 88 aaPredicted RBP23.47■■□□□ 1.35
LINC00543-201ENST00000567234 PROCP04070 461 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 DNAJB1P25685 340 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 CSRP3P50461 194 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 MAXP61244 160 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 CREMQ03060 361 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 FPGSQ05932 587 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 SLC34A1Q06495 639 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 SLC14A2Q15849 920 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 FAM91A1Q658Y4 838 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 ESRP1Q6NXG1 681 aaKnown RBP23.47■■□□□ 1.35
LINC00543-201ENST00000567234 RFWD3Q6PCD5 774 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 DENND1CQ8IV53 801 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 ARHGAP24Q8N264 748 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 BBS5Q8N3I7 341 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 PGBD5Q8N414 524 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 GABPB2Q8TAK5 448 aaPredicted RBP23.47■■□□□ 1.35
LINC00543-201ENST00000567234 NMRK1Q9NWW6 199 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 DLGAP2Q9P1A6 1054 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 STX18Q9P2W9 335 aaKnown RBP23.47■■□□□ 1.35
LINC00543-201ENST00000567234 HAO1Q9UJM8 370 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 ZFP37Q9Y6Q3 630 aaPredicted RBP23.47■■□□□ 1.35
LINC00543-201ENST00000567234 PLXNA4Q9HCM2 1894 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 KIAA1671Q9BY89 1806 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 LOC285095A0A1B0GVY8 99 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 H3BNC9 293 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 PRRG1O14668 218 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 LATS1O95835 1130 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 EPOP01588 193 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 CORO1AP31146 461 aaKnown RBP23.47■■□□□ 1.35
LINC00543-201ENST00000567234 EPHB3P54753 998 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 PLD1Q13393 1074 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms