RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 PAMP19021 973 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 ALDH1A3P47895 512 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 NAGLUP54802 743 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 GEMP55040 296 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 MMEL1Q495T6 779 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 NOMO2Q5JPE7 1267 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 CLLU1OSQ5K130 101 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 BRMS1LQ5PSV4 323 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 PIWIL4Q7Z3Z4 852 aaKnown RBP16.94■□□□□ 0.3
CMTM3-213ENST00000566756 METTL23Q86XA0 190 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 LSMEM2Q8N112 164 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 MARVELD2Q8N4S9 558 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 PPHLN1Q8NEY8 458 aaKnown RBP16.94■□□□□ 0.3
CMTM3-213ENST00000566756 RSPH1Q8WYR4 309 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 SCYL1Q96KG9 808 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 GPR78Q96P69 363 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 HAPLN3Q96S86 360 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 DDX50Q9BQ39 737 aaKnown RBP16.94■□□□□ 0.3
CMTM3-213ENST00000566756 APOL2Q9BQE5 337 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 SPATA16Q9BXB7 569 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 WDR55Q9H6Y2 383 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-213ENST00000566756 EFCAB1Q9HAE3 211 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 ENTPD7Q9NQZ7 604 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 ARHGEF38Q9NXL2 777 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 HACD3Q9P035 362 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 ZDHHC2Q9UIJ5 367 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 DTNAQ9Y4J8 743 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 TET1Q8NFU7 2136 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 TTC3P53804 2025 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 AIM2O14862 343 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 STMN1P16949 149 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 TYMPP19971 482 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 GABRB3P28472 473 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 ABCG1P45844 678 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 ARCN1P48444 511 aaKnown RBP16.93■□□□□ 0.3
CMTM3-213ENST00000566756 PEX6Q13608 980 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 RARS2Q5T160 578 aaKnown RBP16.93■□□□□ 0.3
CMTM3-213ENST00000566756 KIAA0408Q6ZU52 694 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 ANKRD33Q7Z3H0 272 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 LRRC49Q8IUZ0 686 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 KCTD4Q8WVF5 259 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 FAR2Q96K12 515 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 MRPL57Q9BQC6 102 aaKnown RBP16.93■□□□□ 0.3
CMTM3-213ENST00000566756 PRKD2Q9BZL6 878 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 TRIM4Q9C037 500 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 MRPL46Q9H2W6 279 aaKnown RBP16.93■□□□□ 0.3
CMTM3-213ENST00000566756 GLOD4Q9HC38 313 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 MRPL40Q9NQ50 206 aaKnown RBP16.93■□□□□ 0.3
CMTM3-213ENST00000566756 TMEM30AQ9NV96 361 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 WBP1LQ9NX94 342 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 UTP6Q9NYH9 597 aaKnown RBP16.93■□□□□ 0.3
CMTM3-213ENST00000566756 RAB26Q9ULW5 256 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 NEU3Q9UQ49 428 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 PTPRDP23468 1912 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 ENPP3O14638 875 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 PHGDHO43175 533 aaKnown RBP16.93■□□□□ 0.3
CMTM3-213ENST00000566756 DLX3O60479 287 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 PARNO95453 639 aaKnown RBP16.93■□□□□ 0.3
CMTM3-213ENST00000566756 EPHA3P29320 983 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 ADRA1AP35348 466 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 CHN2P52757 468 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 PDK3Q15120 406 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 KIAA0930Q6ICG6 404 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-213ENST00000566756 FAM171BQ6P995 826 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 TAC4Q86UU9 113 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 ADCY4Q8NFM4 1077 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 DBF4BQ8NFT6 615 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 CCDC126Q96EE4 140 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 RTP3Q9BQQ7 232 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 NCKIPSDQ9NZQ3 722 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 XPR1Q9UBH6 696 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 TCAF1Q9Y4C2 921 aa16.93■□□□□ 0.3
CMTM3-213ENST00000566756 TIMM13Q9Y5L4 95 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-213ENST00000566756 SMIM31A0A1B0GVY4 71 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 FAM95CA0A1B0GW59 222 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 EME2A4GXA9 379 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-213ENST00000566756 MATN3O15232 486 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 BRCC3P46736 316 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 PSMD8P48556 350 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 POU4F1Q01851 419 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 DLG1Q12959 904 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 FLOT2Q14254 428 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 RBBP5Q15291 538 aaKnown RBP16.92■□□□□ 0.3
CMTM3-213ENST00000566756 DENND5AQ6IQ26 1287 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 TIGD7Q6NT04 549 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-213ENST00000566756 UGT2A3Q6UWM9 527 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 SLC41A1Q8IVJ1 513 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 ARHGAP12Q8IWW6 846 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 COLGALT2Q8IYK4 626 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 ATPAF2Q8N5M1 289 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 KDM1BQ8NB78 822 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 C2CD4AQ8NCU7 369 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-213ENST00000566756 GABPB2Q8TAK5 448 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-213ENST00000566756 SEPT8Q92599 483 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 NUF2Q9BZD4 464 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 CRISPLD2Q9H0B8 497 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 CATSPERBQ9H7T0 1116 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 DMAP1Q9NPF5 467 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-213ENST00000566756 TREX1Q9NSU2 369 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 FNIP2Q9P278 1114 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms