RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 BRAT1Q6PJG6 821 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 REXO1L1PQ8IX06 675 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 DNASE2BQ8WZ79 361 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 IL12RB2Q99665 862 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 VPS45Q9NRW7 570 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 SUSD2Q9UGT4 822 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 PILRBQ9UKJ0 227 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 DMDP11532 3685 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 NUMA1Q14980 2115 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 KCNK1O00180 336 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 AP1G1O43747 822 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 PIGNO95427 931 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 JCHAINP01591 159 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 TAS2R38P59533 333 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 MAXP61244 160 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 PRKD1Q15139 912 aaPredicted RBP26.41■■□□□ 1.82
NME3-209ENST00000566600 SEL1L2Q5TEA6 688 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 PEAR1Q5VY43 1037 aaPredicted RBP26.41■■□□□ 1.82
NME3-209ENST00000566600 ALG1LQ6GMV1 187 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 CAMK1DQ8IU85 385 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 LRRN4Q8WUT4 740 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 BIRC7Q96CA5 298 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 HAUS1Q96CS2 278 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 FERMT1Q9BQL6 677 aa26.41■■□□□ 1.82
NME3-209ENST00000566600 TNRC6BQ9UPQ9 1833 aaKnown RBP26.4■■□□□ 1.82
NME3-209ENST00000566600 A0A1W2PQ67 120 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 TSPAN11A1L157 253 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 FOXD2O60548 495 aaPredicted RBP26.4■■□□□ 1.82
NME3-209ENST00000566600 SOCS5O75159 536 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 GNSP15586 552 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 XPAP23025 273 aaPredicted RBP26.4■■□□□ 1.82
NME3-209ENST00000566600 NUDT1P36639 197 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 POLR2LP62875 67 aaKnown RBP26.4■■□□□ 1.82
NME3-209ENST00000566600 NOMO1Q15155 1222 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 AADACL2Q6P093 401 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 TTC7BQ86TV6 843 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 TRIM69Q86WT6 500 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 PAF1Q8N7H5 531 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 TTC13Q8NBP0 860 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 CEP76Q8TAP6 659 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 SNX19Q92543 992 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 CARD9Q9H257 536 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 NOD2Q9HC29 1040 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 ATP8A1Q9Y2Q0 1164 aa26.4■■□□□ 1.82
NME3-209ENST00000566600 PIEZO1Q92508 2521 aa26.39■■□□□ 1.82
NME3-209ENST00000566600 ZNF189O75820 626 aaPredicted RBP26.39■■□□□ 1.82
NME3-209ENST00000566600 IGHV4-34P06331 123 aa26.39■■□□□ 1.82
NME3-209ENST00000566600 MSNP26038 577 aaKnown RBP26.39■■□□□ 1.82
NME3-209ENST00000566600 SPEM2Q0P670 501 aa26.39■■□□□ 1.82
NME3-209ENST00000566600 PLA2G2CQ5R387 149 aa26.39■■□□□ 1.82
NME3-209ENST00000566600 ZC3H18Q86VM9 953 aaKnown RBP26.39■■□□□ 1.82
NME3-209ENST00000566600 ZSCAN30Q86W11 494 aa26.39■■□□□ 1.82
NME3-209ENST00000566600 ACTL9Q8TC94 416 aa26.39■■□□□ 1.82
NME3-209ENST00000566600 QKIQ96PU8 341 aaKnown RBP eCLIP26.39■■□□□ 1.82
NME3-209ENST00000566600 SEMA3CQ99985 751 aa26.39■■□□□ 1.82
NME3-209ENST00000566600 HERPUD2Q9BSE4 406 aa26.39■■□□□ 1.82
NME3-209ENST00000566600 SEPT10Q9P0V9 454 aa26.39■■□□□ 1.82
NME3-209ENST00000566600 TTLL3Q9Y4R7 772 aa26.39■■□□□ 1.82
NME3-209ENST00000566600 FADS3Q9Y5Q0 445 aa26.39■■□□□ 1.82
NME3-209ENST00000566600 RIF1Q5UIP0 2472 aaKnown RBP26.39■■□□□ 1.81
NME3-209ENST00000566600 C10orf142B7Z368 130 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 TSPAN6O43657 245 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 PCDH8O95206 1070 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 HLA-DQB2P05538 268 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 ZNF806P0C7X5 589 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 CD27P26842 260 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 OTUD4Q01804 1114 aaKnown RBP26.38■■□□□ 1.81
NME3-209ENST00000566600 CSRP2Q16527 193 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 SLC45A4Q5BKX6 768 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 PRPF39Q86UA1 669 aaKnown RBP26.38■■□□□ 1.81
NME3-209ENST00000566600 ALYREFQ86V81 257 aaKnown RBP26.38■■□□□ 1.81
NME3-209ENST00000566600 DCLK2Q8N568 766 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 ECHDC3Q96DC8 303 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 FEM1CQ96JP0 617 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 TRMT1Q9NXH9 659 aaKnown RBP26.38■■□□□ 1.81
NME3-209ENST00000566600 EIF2B4Q9UI10 523 aaKnown RBP26.38■■□□□ 1.81
NME3-209ENST00000566600 FRYLO94915 3013 aa26.38■■□□□ 1.81
NME3-209ENST00000566600 TTC24A2A3L6 582 aaPredicted RBP26.37■■□□□ 1.81
NME3-209ENST00000566600 PRR5-ARHGAP8B1AHC4 643 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 H7C0C1 242 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 NEMP1O14524 444 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 KCNK3O14649 394 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 LATO43561 262 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 KIF5CO60282 957 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 RNGTTO60942 597 aaKnown RBP26.37■■□□□ 1.81
NME3-209ENST00000566600 GJB3O75712 270 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 TIMP2P16035 220 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 ABL2P42684 1182 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 ATP5OP48047 213 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 ELP6Q0PNE2 266 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 ZBTB17Q13105 803 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 UGP2Q16851 508 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 DUOXA1Q1HG43 343 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 KIAA1161Q6NSJ0 714 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 CDKL3Q8IVW4 592 aaPredicted RBP26.37■■□□□ 1.81
NME3-209ENST00000566600 SPOCK2Q92563 424 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 VAT1Q99536 393 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 MIR1-1HGQ9H1L0 117 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 SEMA4GQ9NTN9 838 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 TMEM74BQ9NUR3 256 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms