RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 EVA1BQ9NVM1 165 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 GPATCH2LQ9NWQ4 482 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 LHX3Q9UBR4 397 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 SCINQ9Y6U3 715 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 URB1O60287 2271 aaKnown RBP20.42■□□□□ 0.86
CLN6-207ENST00000566347 ARHGAP42A6NI28 874 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 TM7SF2O76062 418 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 SERPINC1P01008 464 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 GIMD1P0DJR0 217 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 CKMT1AP12532 417 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 XPAP23025 273 aaPredicted RBP20.41■□□□□ 0.86
CLN6-207ENST00000566347 ZNF135P52742 658 aaPredicted RBP20.41■□□□□ 0.86
CLN6-207ENST00000566347 CLDN6P56747 220 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 PFN3P60673 137 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 PTK2BQ14289 1009 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 CYTH1Q15438 398 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 ZNF542PQ5EBM4 170 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 PSTKQ8IV42 348 aaKnown RBP20.41■□□□□ 0.86
CLN6-207ENST00000566347 FAM181AQ8N9Y4 354 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 CENPTQ96BT3 561 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 PDFQ9HBH1 243 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 USP29Q9HBJ7 922 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 SCUBE2Q9NQ36 999 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 CNOT8Q9UFF9 292 aaKnown RBP20.41■□□□□ 0.86
CLN6-207ENST00000566347 PCSK1NQ9UHG2 260 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 CSNK1G3Q9Y6M4 447 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 LAMA5O15230 3695 aa20.41■□□□□ 0.86
CLN6-207ENST00000566347 TOR1BO14657 336 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 DAPK3O43293 454 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 PRPSAP2O60256 369 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 PRAMEF11O60813 436 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 MYBL1P10243 752 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 TIMP2P16035 220 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 DUSP3P51452 185 aaPredicted RBP20.4■□□□□ 0.86
CLN6-207ENST00000566347 ADAMTS20P59510 1910 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 INSM1Q01101 510 aaPredicted RBP20.4■□□□□ 0.86
CLN6-207ENST00000566347 ELP6Q0PNE2 266 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 MYLKQ15746 1914 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 FIGNQ5HY92 759 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 LRRC73Q5JTD7 316 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 E4F1Q66K89 784 aaPredicted RBP20.4■□□□□ 0.86
CLN6-207ENST00000566347 ARFGAP1Q8N6T3 406 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 NETO2Q8NC67 525 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 ZNF548Q8NEK5 533 aaPredicted RBP20.4■□□□□ 0.86
CLN6-207ENST00000566347 NBEAQ8NFP9 2946 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 ZNF653Q96CK0 615 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 EXOC2Q96KP1 924 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 NAP1L5Q96NT1 182 aaPredicted RBP20.4■□□□□ 0.86
CLN6-207ENST00000566347 SNRNP25Q9BV90 132 aaKnown RBP20.4■□□□□ 0.86
CLN6-207ENST00000566347 NRSN2Q9GZP1 204 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 MRPL47Q9HD33 250 aaKnown RBP20.4■□□□□ 0.86
CLN6-207ENST00000566347 CLCA2Q9UQC9 943 aa20.4■□□□□ 0.86
CLN6-207ENST00000566347 J3KR12 359 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 DDX3XO00571 662 aaKnown RBP eCLIP20.39■□□□□ 0.852e-13■■■□□ 16.8
CLN6-207ENST00000566347 RIOK3O14730 519 aaKnown RBP20.39■□□□□ 0.85
CLN6-207ENST00000566347 INSIG1O15503 277 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 MMP20O60882 483 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 MIPP30301 263 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 PAPOLAP51003 745 aaKnown RBP20.39■□□□□ 0.85
CLN6-207ENST00000566347 THOP1P52888 689 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 YPEL5P62699 121 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 TPM4P67936 248 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 NR1I3Q14994 352 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 IQCB1Q15051 598 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 CA9Q16790 459 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 RFX8Q6ZV50 586 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 VPS36Q86VN1 386 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 BTN2A2Q8WVV5 523 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 CELF6Q96J87 481 aaKnown RBP20.39■□□□□ 0.85
CLN6-207ENST00000566347 APOLD1Q96LR9 279 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 ZNF641Q96N77 438 aaPredicted RBP20.39■□□□□ 0.85
CLN6-207ENST00000566347 PEBP4Q96S96 227 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 KCTD15Q96SI1 283 aaPredicted RBP20.39■□□□□ 0.85
CLN6-207ENST00000566347 SUV39H2Q9H5I1 410 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 NCKIPSDQ9NZQ3 722 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 CACNA1GO43497 2377 aa20.39■□□□□ 0.85
CLN6-207ENST00000566347 TSPAN11A1L157 253 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 K7ESM1 405 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 AQP9O43315 295 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 PIGNO95427 931 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 GP1BAP07359 652 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 JUNDP17535 347 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 RTP5Q14D33 572 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 TMEM52BQ4KMG9 183 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 PPP6R3Q5H9R7 873 aaPredicted RBP20.38■□□□□ 0.85
CLN6-207ENST00000566347 CFAP58Q5T655 872 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 ZCCHC8Q6NZY4 707 aaKnown RBP20.38■□□□□ 0.85
CLN6-207ENST00000566347 BRAT1Q6PJG6 821 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 C19orf48Q6RUI8 117 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 DCBLD1Q8N8Z6 715 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 TUBGCP5Q96RT8 1024 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 FUCA2Q9BTY2 467 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 WRAP53Q9BUR4 548 aaKnown RBP20.38■□□□□ 0.85
CLN6-207ENST00000566347 SLC39A8Q9C0K1 460 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 AK5Q9Y6K8 562 aa20.38■□□□□ 0.85
CLN6-207ENST00000566347 CELSR3Q9NYQ7 3312 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 LRCH4O75427 683 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 PALMO75781 387 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 NEBLO76041 1014 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 ERCC2P18074 760 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms