RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 GTF2A2P52657 109 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 EMP3P54852 163 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 HUNKP57058 714 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 PFKPQ01813 784 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 GRIK4Q16099 956 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 Q3C1V9 767 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 KIAA0930Q6ICG6 404 aaPredicted RBP21.79■■□□□ 1.08
SPSB3-208ENST00000566339 AMIGO2Q86SJ2 522 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 COLGALT2Q8IYK4 626 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 C2CD4AQ8NCU7 369 aaPredicted RBP21.79■■□□□ 1.08
SPSB3-208ENST00000566339 ZSCAN18Q8TBC5 510 aaPredicted RBP21.79■■□□□ 1.08
SPSB3-208ENST00000566339 ELP3Q9H9T3 547 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 CROTQ9UKG9 612 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 PCDHGB4Q9UN71 923 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 G3BP2Q9UN86 482 aaKnown RBP21.79■■□□□ 1.08
SPSB3-208ENST00000566339 PCDHGB5Q9Y5G0 923 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 AQP12BA6NM10 295 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 H3BSA7 217 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 PFDN1O60925 122 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 PGK1P00558 417 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 CD1EP15812 388 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 GABRB3P28472 473 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 SLC26A3P40879 764 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 CD151P48509 253 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 DAOAP59103 153 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 PITX1P78337 314 aaPredicted RBP21.79■■□□□ 1.08
SPSB3-208ENST00000566339 NME3Q13232 169 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 FASTKQ14296 549 aaKnown RBP21.79■■□□□ 1.08
SPSB3-208ENST00000566339 DCLRE1AQ6PJP8 1040 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 TRIM67Q6ZTA4 783 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 CATSPER4Q7RTX7 472 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 SLC41A1Q8IVJ1 513 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 HERC6Q8IVU3 1022 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 AQP12AQ8IXF9 295 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 C2orf69Q8N8R5 385 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 LPGAT1Q92604 370 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 TBL1YQ9BQ87 522 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 TRPV6Q9H1D0 765 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 PLXNB2O15031 1838 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 MYO18AQ92614 2054 aaKnown RBP21.78■■□□□ 1.08
SPSB3-208ENST00000566339 TRIM64A6NGJ6 449 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 KCNU1A8MYU2 1149 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 E7ENX8 843 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 STX16-NPEPL1H3BU86 382 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 SRP72O76094 671 aaKnown RBP21.78■■□□□ 1.08
SPSB3-208ENST00000566339 RECQL4O94761 1208 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 ARCN1P48444 511 aaKnown RBP21.78■■□□□ 1.08
SPSB3-208ENST00000566339 GEMP55040 296 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 ESRRGP62508 458 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 OLIG2Q13516 323 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 GK3PQ14409 553 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 LPIN1Q14693 890 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 SLC14A2Q15849 920 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 DGKDQ16760 1214 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 FAM83EQ2M2I3 478 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 AGAP9Q5VTM2 703 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 SYPL2Q5VXT5 272 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 PM20D1Q6GTS8 502 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 NXNL1Q96CM4 212 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 TSPAN17Q96FV3 270 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 OTUD5Q96G74 571 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 CYP2S1Q96SQ9 504 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 PPP1R16BQ96T49 567 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 TCF12Q99081 682 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 PLGRKTQ9HBL7 147 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 TRPC7Q9HCX4 862 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 ENTPD7Q9NQZ7 604 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 PDGFCQ9NRA1 345 aa21.78■■□□□ 1.08
SPSB3-208ENST00000566339 DDX18Q9NVP1 670 aaKnown RBP21.78■■□□□ 1.08
SPSB3-208ENST00000566339 H3BRB1 525 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 HTRA2O43464 458 aaPredicted RBP21.77■■□□□ 1.08
SPSB3-208ENST00000566339 CLASP2O75122 1294 aaKnown RBP21.77■■□□□ 1.08
SPSB3-208ENST00000566339 TRPA1O75762 1119 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 PTPN1P18031 435 aaKnown RBP21.77■■□□□ 1.08
SPSB3-208ENST00000566339 SLC12A2P55011 1212 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 TAPT1Q6NXT6 567 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 GK5Q6ZS86 529 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 CLEC20AQ6ZU45 233 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 LPCAT2Q7L5N7 544 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 ERMP1Q7Z2K6 904 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 NPWQ8N729 165 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 CCNYL1Q8N7R7 359 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 PCYOX1LQ8NBM8 494 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 CALML6Q8TD86 181 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 ASB2Q96Q27 587 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 HOPXQ9BPY8 73 aaPredicted RBP21.77■■□□□ 1.08
SPSB3-208ENST00000566339 TMEM79Q9BSE2 394 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 MUC13Q9H3R2 512 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 POMKQ9H5K3 350 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 TUT1Q9H6E5 874 aaKnown RBP21.77■■□□□ 1.08
SPSB3-208ENST00000566339 OLAHQ9NV23 265 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 TCAF1Q9Y4C2 921 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 HES2Q9Y543 173 aa21.77■■□□□ 1.08
SPSB3-208ENST00000566339 SMIM28A0A1B0GU29 152 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 FAM72CH0Y354 149 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 SPTLC1O15269 473 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 NRP2O60462 931 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 GPC4O75487 556 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 JUNP05412 331 aaKnown RBP21.76■■□□□ 1.07
SPSB3-208ENST00000566339 LRPAP1P30533 357 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms