RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 RFXAPO00287 272 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 BUD23O43709 281 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 MOSPD3O75425 235 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 CD160O95971 181 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 C1RP00736 705 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 PIRTP0C851 137 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 HOXD9P28356 352 aaPredicted RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 ADRA1AP35348 466 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 WNT3AP56704 352 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ZNF33AQ06730 810 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ZNF177Q13360 481 aaPredicted RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 LBRQ14739 615 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 TEAD2Q15562 447 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 C5orf22Q49AR2 442 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ANKRD20A4Q4UJ75 823 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 PABPC1LQ4VXU2 614 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 HSP90AA5PQ58FG0 334 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 PPM1LQ5SGD2 360 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ITPRIPL1Q6GPH6 555 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 CXorf57Q6NSI4 855 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 RANBP10Q6VN20 620 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 CDHR3Q6ZTQ4 885 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 SH2D5Q6ZV89 423 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 TAOK1Q7L7X3 1001 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ITIH5Q86UX2 942 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 TDRPQ86YL5 185 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ARFGAP2Q8N6H7 521 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ACVR1CQ8NER5 493 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 SHKBP1Q8TBC3 707 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ARRDC2Q8TBH0 407 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 PHOSPHO2Q8TCD6 241 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 MYLIPQ8WY64 445 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ING5Q8WYH8 240 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ZNF669Q96BR6 464 aaPredicted RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 PLD4Q96BZ4 506 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 LRRC39Q96DD0 335 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 TMA16Q96EY4 203 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 IMP4Q96G21 291 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 CCT8L2Q96SF2 557 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 SEMA3CQ99985 751 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 TBL1YQ9BQ87 522 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 EMILIN2Q9BXX0 1053 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 FRMD8Q9BZ67 464 aaPredicted RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 SLC13A1Q9BZW2 595 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 BFARQ9NZS9 450 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 SLC17A7Q9P2U7 560 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 YBX2Q9Y2T7 364 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 AAR2Q9Y312 384 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 KCTD3Q9Y597 815 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 IRAK3Q9Y616 596 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 IKBKGQ9Y6K9 419 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 GMNCA6NCL1 334 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 FAM159BA6NKW6 160 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 TRIM49D1C9J1S8 452 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 H0Y626 953 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 TYROBPO43914 113 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 PRAMEF11O60813 436 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 CLASP2O75122 1294 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 ALDH1A2O94788 518 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 OLFM2O95897 454 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 PDGFAP04085 211 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 INHBAP08476 426 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 FOXN2P32314 431 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 MAGEA10P43363 369 aaPredicted RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 SCNN1BP51168 640 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 CDH4P55283 916 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 PRPSAP1Q14558 356 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 CNGA3Q16281 694 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 KLHL38Q2WGJ6 581 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 PARP15Q460N3 678 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 STEAP4Q687X5 459 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 TIGD7Q6NT04 549 aaPredicted RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 ESRP1Q6NXG1 681 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 MRPL14Q6P1L8 145 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 GRASPQ7Z6J2 395 aaPredicted RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 CROCCP2Q86T23 111 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 TMEM135Q86UB9 458 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 SLC26A11Q86WA9 606 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 APCDD1Q8J025 514 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 GJD3Q8N144 294 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 TEX26Q8N6G2 289 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 DENND1AQ8TEH3 1009 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 DDI1Q8WTU0 396 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 MRPS31Q92665 395 aaKnown RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 HSH2DQ96JZ2 352 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 APOL5Q9BWW9 433 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 FSD1LQ9BXM9 530 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 STMN4Q9H169 189 aaPredicted RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 MUC3BQ9H195 1237 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 EPN3Q9H201 632 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 LRRC40Q9H9A6 602 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 PDFQ9HBH1 243 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 NOD2Q9HC29 1040 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ATP13A1Q9HD20 1204 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 SAMD15Q9P1V8 674 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 UXTQ9UBK9 157 aaPredicted RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 ANKRD36A6QL64 1941 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 CCDC195A0A1B0GUA6 201 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 EPOPA6NHQ4 379 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 ANKRD65E5RJM6 399 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms