RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 CLDN11O75508 207 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 ALPPL2P10696 532 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 CKMT1AP12532 417 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 CCR1P32246 355 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 DRD3P35462 400 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 LSSP48449 732 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 KRT83P78385 493 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 TBC1D25Q3MII6 688 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 CDCP2Q5VXM1 449 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 ANKRD40Q6AI12 368 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 DHX40Q8IX18 779 aaKnown RBP8.53□□□□□ -1.04
CDH13-207ENST00000565636 CARNMT1Q8N4J0 409 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 AADATQ8N5Z0 425 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 EID2Q8N6I1 236 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 OR4C6Q8NH72 309 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 LMO3Q8TAP4 145 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 WFDC5Q8TCV5 224 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 FRS2Q8WU20 508 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 ASB12Q8WXK4 309 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 TFAP2BQ92481 460 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 ALKBH8Q96BT7 664 aaKnown RBP8.53□□□□□ -1.04
CDH13-207ENST00000565636 C1orf74Q96LT6 269 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 SLC6A18Q96N87 628 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 PRMT1Q99873 361 aaKnown RBP8.53□□□□□ -1.04
CDH13-207ENST00000565636 MMRN2Q9H8L6 949 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 SSU72Q9NP77 194 aaKnown RBP8.53□□□□□ -1.04
CDH13-207ENST00000565636 SLCO3A1Q9UIG8 710 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 SLC25A13Q9UJS0 675 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 MAPK8IP1Q9UQF2 711 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 HS3ST2Q9Y278 367 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 TBC1D30Q9Y2I9 924 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 PAXBP1Q9Y5B6 917 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 PCDHB4Q9Y5E5 795 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 SLCO1B1Q9Y6L6 691 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 UNC13CQ8NB66 2214 aa8.53□□□□□ -1.04
CDH13-207ENST00000565636 CFAP46Q8IYW2 2715 aa8.52□□□□□ -1.04
CDH13-207ENST00000565636 GOLGA6L7A0A1B0GV03 622 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 TTC34A8MYJ7 566 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 KCNK3O14649 394 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 TPP1O14773 563 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 MSI1O43347 362 aaKnown RBP8.52□□□□□ -1.05
CDH13-207ENST00000565636 FGFR1OPO95684 399 aaKnown RBP8.52□□□□□ -1.05
CDH13-207ENST00000565636 TRUB2O95900 331 aaKnown RBP8.52□□□□□ -1.05
CDH13-207ENST00000565636 F9P00740 461 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 IL1BP01584 269 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 TACR2P21452 398 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 GLDCP23378 1020 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 SGSHP51688 502 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 RPS24P62847 133 aaKnown RBP8.52□□□□□ -1.05
CDH13-207ENST00000565636 CDK17Q00537 523 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 CDK5R2Q13319 367 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 FSCBQ5H9T9 825 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 HES3Q5TGS1 186 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 BROXQ5VW32 411 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.52□□□□□ -1.05
CDH13-207ENST00000565636 ZNF783Q6ZMS7 281 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 ZNF605Q86T29 641 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 SETD3Q86TU7 594 aaPredicted RBP8.52□□□□□ -1.05
CDH13-207ENST00000565636 ZDHHC17Q8IUH5 632 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 CCAR2Q8N163 923 aaKnown RBP8.52□□□□□ -1.05
CDH13-207ENST00000565636 SDR16C5Q8N3Y7 309 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 ZNF366Q8N895 744 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 TMEM145Q8NBT3 493 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 ZNF606Q8WXB4 792 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 NDRG1Q92597 394 aaKnown RBP8.52□□□□□ -1.05
CDH13-207ENST00000565636 RNF34Q969K3 372 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 ERLEC1Q96DZ1 483 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 ALG14Q96F25 216 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 TBATAQ96M53 351 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 PRICKLE1Q96MT3 831 aaPredicted RBP8.52□□□□□ -1.05
CDH13-207ENST00000565636 FEM1AQ9BSK4 669 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 HDAC8Q9BY41 377 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 NLGN3Q9NZ94 848 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 SERGEFQ9UGK8 458 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 CEP83Q9Y592 693 aa8.52□□□□□ -1.05
CDH13-207ENST00000565636 SMG1Q96Q15 3661 aaKnown RBP8.52□□□□□ -1.05
CDH13-207ENST00000565636 ATMQ13315 3056 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.51□□□□□ -1.05
CDH13-207ENST00000565636 FAM149AA5PLN7 773 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 FAM47DPA6NHR8 397 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 M0QYV0 167 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 MT-CO3P00414 261 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 CDH4P55283 916 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 HNRNPKP61978 463 aaKnown RBP eCLIP8.51□□□□□ -1.05
CDH13-207ENST00000565636 BNIP3Q12983 259 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 ZNF177Q13360 481 aaPredicted RBP8.51□□□□□ -1.05
CDH13-207ENST00000565636 DCAF17Q5H9S7 520 aaPredicted RBP8.51□□□□□ -1.05
CDH13-207ENST00000565636 SPATS2Q86XZ4 545 aaKnown RBP8.51□□□□□ -1.05
CDH13-207ENST00000565636 GATAD2AQ86YP4 633 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 LGI2Q8N0V4 545 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 STK40Q8N2I9 435 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 PPM1KQ8N3J5 372 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 SLC25A45Q8N413 288 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 SH2D3CQ8N5H7 860 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 C1orf131Q8NDD1 294 aaKnown RBP8.51□□□□□ -1.05
CDH13-207ENST00000565636 ZNF397Q8NF99 534 aaPredicted RBP8.51□□□□□ -1.05
CDH13-207ENST00000565636 SMARCE1Q969G3 411 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 PGAP3Q96FM1 320 aaPredicted RBP8.51□□□□□ -1.05
CDH13-207ENST00000565636 PPP1R16AQ96I34 528 aa8.51□□□□□ -1.05
CDH13-207ENST00000565636 HIC2Q96JB3 615 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms