RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ARHGAP42A6NI28 874 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 H3BM21 787 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 SCAMP1O15126 338 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 FFAR2O15552 330 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 PRPSAP2O60256 369 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 PRAMEF11O60813 436 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 SERPINC1P01008 464 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 MYBL1P10243 752 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 MIPP30301 263 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 DAB2P98082 770 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 E2F1Q01094 437 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 RFX8Q6ZV50 586 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 FAM181AQ8N9Y4 354 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 NETO2Q8NC67 525 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 CXorf40AQ8TE69 158 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 ZNF653Q96CK0 615 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 NXPE2Q96DL1 559 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 DUSP23Q9BVJ7 150 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 C1QTNF7Q9BXJ2 289 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 SLC39A8Q9C0K1 460 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 MRPL47Q9HD33 250 aaKnown RBP20.11■□□□□ 0.81
CLN6-206ENST00000565471 PCSK1NQ9UHG2 260 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 IPO11Q9UI26 975 aaKnown RBP20.11■□□□□ 0.81
CLN6-206ENST00000565471 RALYQ9UKM9 306 aaKnown RBP20.11■□□□□ 0.81
CLN6-206ENST00000565471 LHX6Q9UPM6 363 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 RAXQ9Y2V3 346 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 CSNK1G3Q9Y6M4 447 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 TDRD6O60522 2096 aaKnown RBP20.11■□□□□ 0.81
CLN6-206ENST00000565471 J3KR12 359 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 TOR1BO14657 336 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 INSIG1O15503 277 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 TM7SF2O76062 418 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 CKMT1AP12532 417 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 TIMP2P16035 220 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 CLDN6P56747 220 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 ELP6Q0PNE2 266 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 TARDBPQ13148 414 aaKnown RBP eCLIP20.1■□□□□ 0.812e-43■■■■■ 32.4
CLN6-206ENST00000565471 PDE1CQ14123 709 aaPredicted RBP20.1■□□□□ 0.81
CLN6-206ENST00000565471 ZNF542PQ5EBM4 170 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 AFMIDQ63HM1 303 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 CYP4V2Q6ZWL3 525 aaPredicted RBP20.1■□□□□ 0.81
CLN6-206ENST00000565471 ZNF548Q8NEK5 533 aaPredicted RBP20.1■□□□□ 0.81
CLN6-206ENST00000565471 CELF6Q96J87 481 aaKnown RBP20.1■□□□□ 0.81
CLN6-206ENST00000565471 EXOC2Q96KP1 924 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 KCTD15Q96SI1 283 aaPredicted RBP20.1■□□□□ 0.81
CLN6-206ENST00000565471 TRIM7Q9C029 511 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 ISCUQ9H1K1 167 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 USP29Q9HBJ7 922 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 ACACAQ13085 2346 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 WDFY3Q8IZQ1 3526 aa20.1■□□□□ 0.81
CLN6-206ENST00000565471 APC2O95996 2303 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 ANKRD11Q6UB99 2663 aaPredicted RBP20.09■□□□□ 0.81
CLN6-206ENST00000565471 DAPK3O43293 454 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 MMP20O60882 483 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 LRCH4O75427 683 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 ERCC2P18074 760 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 XPAP23025 273 aaPredicted RBP20.09■□□□□ 0.81
CLN6-206ENST00000565471 IGFALSP35858 605 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 CSNK1DP48730 415 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 HCAR3P49019 387 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 PAPOLAP51003 745 aaKnown RBP20.09■□□□□ 0.81
CLN6-206ENST00000565471 YPEL5P62699 121 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 TPM4P67936 248 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 INSM1Q01101 510 aaPredicted RBP20.09■□□□□ 0.81
CLN6-206ENST00000565471 PTK2BQ14289 1009 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 ACAP1Q15027 740 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 TMEM52BQ4KMG9 183 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 LRRC73Q5JTD7 316 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 TPRG1LQ5T0D9 272 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 APOLD1Q96LR9 279 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 ZNF641Q96N77 438 aaPredicted RBP20.09■□□□□ 0.81
CLN6-206ENST00000565471 TUBGCP5Q96RT8 1024 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 NRSN2Q9GZP1 204 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 SUV39H2Q9H5I1 410 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 CAAP1Q9H8G2 361 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 SCUBE2Q9NQ36 999 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 EVA1BQ9NVM1 165 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 CLCA2Q9UQC9 943 aa20.09■□□□□ 0.81
CLN6-206ENST00000565471 A0A1W2PQJ5 194 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 K7ESM1 405 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 RIOK3O14730 519 aaKnown RBP20.08■□□□□ 0.81
CLN6-206ENST00000565471 PIGNO95427 931 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 SKILP12757 684 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 PCK1P35558 622 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 THOP1P52888 689 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 EIF2B5Q13144 721 aaKnown RBP20.08■□□□□ 0.81
CLN6-206ENST00000565471 UGP2Q16851 508 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 KLHL40Q2TBA0 621 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 PPP6R3Q5H9R7 873 aaPredicted RBP20.08■□□□□ 0.81
CLN6-206ENST00000565471 BRAT1Q6PJG6 821 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 VPS36Q86VN1 386 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 ARHGAP12Q8IWW6 846 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 DCBLD1Q8N8Z6 715 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 BTN2A2Q8WVV5 523 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 SYN2Q92777 582 aaPredicted RBP20.08■□□□□ 0.81
CLN6-206ENST00000565471 KLF15Q9UIH9 416 aa20.08■□□□□ 0.81
CLN6-206ENST00000565471 BZW2Q9Y6E2 419 aaKnown RBP20.08■□□□□ 0.81
CLN6-206ENST00000565471 ADAMTS20P59510 1910 aa20.08■□□□□ 0.8
CLN6-206ENST00000565471 AQP9O43315 295 aa20.07■□□□□ 0.8
CLN6-206ENST00000565471 PALMO75781 387 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms