RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 FGF11Q92914 225 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 ZNF653Q96CK0 615 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 EPAS1Q99814 870 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 DUSP23Q9BVJ7 150 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 USP29Q9HBJ7 922 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 GGT7Q9UJ14 662 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 FZD10Q9ULW2 581 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 U3KQA8 63 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 BPTFQ12830 3046 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 SHROOM3Q8TF72 1996 aa18.75■□□□□ 0.59
CLN6-204ENST00000564752 TRPM6Q9BX84 2022 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 A0A1W2PQJ5 194 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 ZSCAN5CA6NGD5 496 aaPredicted RBP18.74■□□□□ 0.59
CLN6-204ENST00000564752 NEMP1O14524 444 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 SPINT1O43278 529 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 CREB3O43889 395 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 OPA1O60313 960 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 BRINP1O60477 761 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 NEBLO76041 1014 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 FTLP02792 175 aaPredicted RBP18.74■□□□□ 0.59
CLN6-204ENST00000564752 UGT2B4P06133 528 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 GP1BAP07359 652 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 MYF5P13349 255 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 PBX1P40424 430 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 PDE1CQ14123 709 aaPredicted RBP18.74■□□□□ 0.59
CLN6-204ENST00000564752 ATXN7L2Q5T6C5 722 aaPredicted RBP18.74■□□□□ 0.59
CLN6-204ENST00000564752 LRRC69Q6ZNQ3 347 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 PARGQ86W56 976 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 RTL3Q8N8U3 475 aaKnown RBP18.74■□□□□ 0.59
CLN6-204ENST00000564752 DENND6BQ8NEG7 585 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 ZNF548Q8NEK5 533 aaPredicted RBP18.74■□□□□ 0.59
CLN6-204ENST00000564752 SNIP1Q8TAD8 396 aaKnown RBP18.74■□□□□ 0.59
CLN6-204ENST00000564752 IQCDQ96DY2 449 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 TRIM11Q96F44 468 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 KLHL32Q96NJ5 620 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 OSBPL1AQ9BXW6 950 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 NOL6Q9H6R4 1146 aaKnown RBP18.74■□□□□ 0.59
CLN6-204ENST00000564752 CNOT8Q9UFF9 292 aaKnown RBP18.74■□□□□ 0.59
CLN6-204ENST00000564752 IPO11Q9UI26 975 aaKnown RBP18.74■□□□□ 0.59
CLN6-204ENST00000564752 KLF15Q9UIH9 416 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 ITM2BQ9Y287 266 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 CSNK1G3Q9Y6M4 447 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 SCINQ9Y6U3 715 aa18.74■□□□□ 0.59
CLN6-204ENST00000564752 AREL1O15033 823 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 RRP8O43159 456 aaKnown RBP18.73■□□□□ 0.59
CLN6-204ENST00000564752 BUB1O43683 1085 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 DUSP3P51452 185 aaPredicted RBP18.73■□□□□ 0.59
CLN6-204ENST00000564752 PFN3P60673 137 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 INO80DQ53TQ3 878 aaPredicted RBP18.73■□□□□ 0.59
CLN6-204ENST00000564752 TPRG1LQ5T0D9 272 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 GDPD4Q6W3E5 623 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 TTC7BQ86TV6 843 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 VPS36Q86VN1 386 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 ZNF354CQ86Y25 554 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 CASKIN2Q8WXE0 1202 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 CENPTQ96BT3 561 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 ARHGEF26Q96DR7 871 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 CATSPERBQ9H7T0 1116 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 IFNKQ9P0W0 207 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 PCDHB1Q9Y5F3 818 aa18.73■□□□□ 0.59
CLN6-204ENST00000564752 H3BM21 787 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 TMCC1O94876 653 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 TPM3P06753 285 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 MYBL1P10243 752 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 ACTN2P35609 894 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 ZBED6P86452 979 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 EIF2B5Q13144 721 aaKnown RBP18.72■□□□□ 0.59
CLN6-204ENST00000564752 GDAP1L1Q96MZ0 367 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.72■□□□□ 0.59
CLN6-204ENST00000564752 KLC2Q9H0B6 622 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 PRORYQ9H606 182 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 EVA1BQ9NVM1 165 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 MYO1AQ9UBC5 1043 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 AP4E1Q9UPM8 1137 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 MFHAS1Q9Y4C4 1052 aa18.72■□□□□ 0.59
CLN6-204ENST00000564752 BZW2Q9Y6E2 419 aaKnown RBP18.72■□□□□ 0.59
CLN6-204ENST00000564752 TMEM191CA6NGB0 347 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 WASH4PA8MWX3 477 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 FGF10O15520 208 aaPredicted RBP18.71■□□□□ 0.59
CLN6-204ENST00000564752 AQP9O43315 295 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 RNF8O76064 485 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 JUNDP17535 347 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 YBEYP58557 167 aaPredicted RBP18.71■□□□□ 0.59
CLN6-204ENST00000564752 TPI1P60174 286 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 RAD51Q06609 339 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 TBC1D25Q3MII6 688 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 HGSNATQ68CP4 663 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 ZCCHC8Q6NZY4 707 aaKnown RBP18.71■□□□□ 0.59
CLN6-204ENST00000564752 FNIP1Q8TF40 1166 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 CPLX3Q8WVH0 158 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 SYN2Q92777 582 aaPredicted RBP18.71■□□□□ 0.59
CLN6-204ENST00000564752 ABCG4Q9H172 646 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 MRPL47Q9HD33 250 aaKnown RBP18.71■□□□□ 0.59
CLN6-204ENST00000564752 GPATCH2LQ9NWQ4 482 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 DKK3Q9UBP4 350 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 CAPN11Q9UMQ6 739 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 RAI2Q9Y5P3 530 aa18.71■□□□□ 0.59
CLN6-204ENST00000564752 RASA4BC9J798 803 aa18.7■□□□□ 0.58
CLN6-204ENST00000564752 RASA4O43374 803 aa18.7■□□□□ 0.58
CLN6-204ENST00000564752 MMP20O60882 483 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms