RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PYROXD2Q8N2H3 581 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 TPCN2Q8NHX9 752 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 CXorf40AQ8TE69 158 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 FNIP1Q8TF40 1166 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 BAP1Q92560 729 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 GLMNQ92990 594 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 VOPP1Q96AW1 172 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 APOLD1Q96LR9 279 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 MCEEQ96PE7 176 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 SYT11Q9BT88 431 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 EDEM3Q9BZQ6 932 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 ABCG4Q9H172 646 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 AIPL1Q9NZN9 384 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 SPASTQ9UBP0 616 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 TDRD6O60522 2096 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 ASXL3Q9C0F0 2248 aa12.34□□□□□ -0.43
GTF3C1-204ENST00000564664 A0A1W2PQC6 194 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 CFAP69A5D8W1 941 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 ARHGAP42A6NI28 874 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 FFAR2O15552 330 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 AQP9O43315 295 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 LZTS3O60299 673 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 OPA1O60313 960 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 RNF8O76064 485 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 ATP1A3P13637 1013 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 JUNDP17535 347 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 XPAP23025 273 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 GKP32189 559 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 ACTN2P35609 894 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 EIF2S3P41091 472 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 HCAR3P49019 387 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 RPIAP49247 311 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 BLKP51451 505 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 TYRO3Q06418 890 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 NSUN2Q08J23 767 aaKnown RBP eCLIP12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 ACAP1Q15027 740 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 CYTH1Q15438 398 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 TMEM52BQ4KMG9 183 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 ATXN7L2Q5T6C5 722 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 ERMARDQ5T6L9 678 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 PLEKHA7Q6IQ23 1121 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 BRAT1Q6PJG6 821 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 SDR16C5Q8N3Y7 309 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 ZNF548Q8NEK5 533 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 OR6K2Q8NGY2 324 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 SNIP1Q8TAD8 396 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 FGF11Q92914 225 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 HMCESQ96FZ2 354 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 DEPDC7Q96QD5 511 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 TUBGCP5Q96RT8 1024 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 SUV39H2Q9H5I1 410 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 LRRC19Q9H756 370 aa12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 UBA2Q9UBT2 640 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-204ENST00000564664 TSPAN11A1L157 253 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 PRAMEF11O60813 436 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 MYBL1P10243 752 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 PRKCIP41743 596 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 THOP1P52888 689 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 TPI1P60174 286 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 RFTN1Q14699 578 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 AGERQ15109 404 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 UGP2Q16851 508 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 ZNF542PQ5EBM4 170 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 TMCO4Q5TGY1 634 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 ERAP2Q6P179 960 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 LEKR1Q6ZMV7 388 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 AOPEPQ8N6M6 819 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 WDR48Q8TAF3 677 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 TRIM11Q96F44 468 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 IL12RB2Q99665 862 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 SLC13A1Q9BZW2 595 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 MRPL47Q9HD33 250 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 ITPR1Q14643 2758 aa12.32□□□□□ -0.44
GTF3C1-204ENST00000564664 NBEAQ8NFP9 2946 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 MYLKQ15746 1914 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 TMEM191CA6NGB0 347 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 LMO7DNF2Z398 122 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 EEF2KO00418 725 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 TEX33O43247 280 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 SPINT1O43278 529 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 DAPK3O43293 454 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 MMP20O60882 483 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 FTLP02792 175 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 PSMA2P25787 234 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 EIF4A3P38919 411 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 ABCG1P45844 678 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 POLR2LP62875 67 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 SEMG2Q02383 582 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 EIF2B5Q13144 721 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 LVRNQ6Q4G3 990 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 MACC1Q6ZN28 852 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 LZTR1Q8N653 840 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 ATL2Q8NHH9 583 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 SCG3Q8WXD2 468 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 ZNF578Q96N58 590 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 KLC2Q9H0B6 622 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 PDFQ9HBH1 243 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 TAS2R14Q9NYV8 317 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 LHX3Q9UBR4 397 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms