RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 METAP1P53582 386 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 YBEYP58557 167 aaPredicted RBP19.22■□□□□ 0.67
NME3-207ENST00000564628 E2F1Q01094 437 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 SLC20A2Q08357 652 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 ZNF211Q13398 564 aaPredicted RBP19.22■□□□□ 0.67
NME3-207ENST00000564628 DPYSQ14117 519 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 AGBL4Q5VU57 503 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 RETSATQ6NUM9 610 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 LINGO4Q6UY18 593 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 RFX8Q6ZV50 586 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 CPNE8Q86YQ8 564 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 FAM71BQ8TC56 605 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 KLC2Q9H0B6 622 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 CWC15Q9P013 229 aaKnown RBP19.22■□□□□ 0.67
NME3-207ENST00000564628 SARDHQ9UL12 918 aa19.22■□□□□ 0.67
NME3-207ENST00000564628 MYLKQ15746 1914 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 K7ERQ8 282 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 ZNF821O75541 412 aaPredicted RBP19.21■□□□□ 0.67
NME3-207ENST00000564628 MAT2AP31153 395 aaKnown RBP19.21■□□□□ 0.67
NME3-207ENST00000564628 ACTN2P35609 894 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 INSM1Q01101 510 aaPredicted RBP19.21■□□□□ 0.67
NME3-207ENST00000564628 CNTN1Q12860 1018 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 POLD3Q15054 466 aaPredicted RBP19.21■□□□□ 0.67
NME3-207ENST00000564628 SMTNL2Q2TAL5 461 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 PARP15Q460N3 678 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 PPP6R3Q5H9R7 873 aaPredicted RBP19.21■□□□□ 0.67
NME3-207ENST00000564628 C22orf39Q6P5X5 142 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 Q6ZVU0 165 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 RHOT2Q8IXI1 618 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 ATP11CQ8NB49 1132 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 SLC35G2Q8TBE7 412 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 FCRL3Q96P31 734 aaPredicted RBP19.21■□□□□ 0.67
NME3-207ENST00000564628 CEP44Q9C0F1 390 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 LRRC19Q9H756 370 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 PREBQ9HCU5 417 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 DONSONQ9NYP3 566 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 RAI2Q9Y5P3 530 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 ARID1BQ8NFD5 2236 aaPredicted RBP19.21■□□□□ 0.67
NME3-207ENST00000564628 BPTFQ12830 3046 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 SHROOM3Q8TF72 1996 aa19.21■□□□□ 0.67
NME3-207ENST00000564628 RASA4BC9J798 803 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 RASA4O43374 803 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 KDELR3O43731 214 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 KALRNO60229 2985 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 BRINP1O60477 761 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 C1QL1O75973 258 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 ACCSLQ4AC99 568 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 AFMIDQ63HM1 303 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 NEK5Q6P3R8 708 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 POLNQ7Z5Q5 900 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 TMTC1Q8IUR5 882 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 SLC25A45Q8N413 288 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 TMEM145Q8NBT3 493 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 OR2A12Q8NGT7 310 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 HMCESQ96FZ2 354 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 KLHDC7BQ96G42 594 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 ZWILCHQ9H900 591 aa19.2■□□□□ 0.66
NME3-207ENST00000564628 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.2■□□□□ 0.66
NME3-207ENST00000564628 PTPRQQ9UMZ3 2332 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 TEX51A0A1B0GUA7 166 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 H3BRJ5 948 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 TRIM38O00635 465 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 SIGLEC6O43699 453 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 PRB1P04280 392 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 ERCC2P18074 760 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 ARHGAP25P42331 645 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 ARSEP51690 589 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 NDST2P52849 883 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 HADHBP55084 474 aaKnown RBP19.19■□□□□ 0.66
NME3-207ENST00000564628 GEMIN4P57678 1058 aaKnown RBP19.19■□□□□ 0.66
NME3-207ENST00000564628 TAS2R40P59535 323 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 SERINC3Q13530 473 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 TBC1D25Q3MII6 688 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 TMEM139Q8IV31 216 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 HSPH1Q92598 858 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 PCDH18Q9HCL0 1135 aa19.19■□□□□ 0.66
NME3-207ENST00000564628 ZSCAN5CA6NGD5 496 aaPredicted RBP19.18■□□□□ 0.66
NME3-207ENST00000564628 SOWAHDA6NJG2 315 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 SDC3O75056 442 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 CYLC1P35663 651 aaPredicted RBP19.18■□□□□ 0.66
NME3-207ENST00000564628 MAGEA1P43355 309 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 TAS2R38P59533 333 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 TLE3Q04726 772 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 CCDC15Q0P6D6 951 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 HADHQ16836 314 aaKnown RBP19.18■□□□□ 0.66
NME3-207ENST00000564628 GPR155Q7Z3F1 870 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 LRRC8AQ8IWT6 810 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 ARHGAP12Q8IWW6 846 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 PCDH20Q8N6Y1 951 aaKnown RBP19.18■□□□□ 0.66
NME3-207ENST00000564628 NPWQ8N729 165 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 CCDC112Q8NEF3 446 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 OR4C6Q8NH72 309 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 ISG20Q96AZ6 181 aaKnown RBP19.18■□□□□ 0.66
NME3-207ENST00000564628 CSPG4P5Q96PW8 444 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 KLHL11Q9NVR0 708 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 RCOR3Q9P2K3 495 aaPredicted RBP19.18■□□□□ 0.66
NME3-207ENST00000564628 HPCAL4Q9UM19 191 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 ACTL7AQ9Y615 435 aa19.18■□□□□ 0.66
NME3-207ENST00000564628 EPN1Q9Y6I3 576 aaPredicted RBP19.18■□□□□ 0.66
NME3-207ENST00000564628 SETXQ7Z333 2677 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms