RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 WDR5BQ86VZ2 330 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 LONP2Q86WA8 852 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 MAGOHBQ96A72 148 aaKnown RBP12.6□□□□□ -0.39
KARS-204ENST00000564578 ZNF641Q96N77 438 aaPredicted RBP12.6□□□□□ -0.39
KARS-204ENST00000564578 SPATA13Q96N96 652 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 RBM15Q96T37 977 aaKnown RBP eCLIP12.6□□□□□ -0.396e-7■■■■■ 36.2
KARS-204ENST00000564578 OSBPL1AQ9BXW6 950 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 FAM126AQ9BYI3 521 aaPredicted RBP12.6□□□□□ -0.39
KARS-204ENST00000564578 SLC25A51Q9H1U9 297 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 NEUROG2Q9H2A3 272 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 ATP13A3Q9H7F0 1226 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 KLHL8Q9P2G9 620 aaPredicted RBP12.6□□□□□ -0.39
KARS-204ENST00000564578 RNF14Q9UBS8 474 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 SCML1Q9UN30 329 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 ABCA7Q8IZY2 2146 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 IGHV1OR15-9A0A0B4J2B8 117 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 CFAP69A5D8W1 941 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 C1QTNF3-AMACRE9PGA6 284 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 H0Y858 1186 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 KIF2AO00139 706 aaPredicted RBP12.59□□□□□ -0.39
KARS-204ENST00000564578 FZD6O60353 706 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 NEBLO76041 1014 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 PRLP01236 227 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 PDHA1P08559 390 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 ACADMP11310 421 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 ETS1P14921 441 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 CES1P23141 567 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 ITGB7P26010 798 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 ACSL1P33121 698 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 CD86P42081 329 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 TAS2R38P59533 333 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 BCL2L1Q07817 233 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 CNTN1Q12860 1018 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 SRSF5Q13243 272 aaKnown RBP12.59□□□□□ -0.39
KARS-204ENST00000564578 GRM3Q14832 879 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 PIP5KL1Q5T9C9 394 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 AGBL4Q5VU57 503 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 USP30Q70CQ3 517 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 PARS2Q7L3T8 475 aaKnown RBP12.59□□□□□ -0.39
KARS-204ENST00000564578 HDDC3Q8N4P3 179 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 PRSS33Q8NF86 280 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 OXNAD1Q96HP4 312 aaPredicted RBP12.59□□□□□ -0.39
KARS-204ENST00000564578 FCRL5Q96RD9 977 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 HDAC8Q9BY41 377 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 UBP1Q9NZI7 540 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 INVSQ9Y283 1065 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 LAMA1P25391 3075 aa12.59□□□□□ -0.39
KARS-204ENST00000564578 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.58□□□□□ -0.39
KARS-204ENST00000564578 TSPAN11A1L157 253 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 C16orf96A6NNT2 1141 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 F5H423 210 aaPredicted RBP12.58□□□□□ -0.39
KARS-204ENST00000564578 HRO43593 1189 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 OPHN1O60890 802 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 SOCS5O75159 536 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 ZNF217O75362 1048 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 RNASEH2AO75792 299 aaKnown RBP12.58□□□□□ -0.39
KARS-204ENST00000564578 METTL18O95568 372 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 SERPINF2P08697 491 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 ZSCAN5DPP0CG00 497 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 SERPINA4P29622 427 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 COILP38432 576 aaPredicted RBP12.58□□□□□ -0.39
KARS-204ENST00000564578 CCDC137Q6PK04 289 aaKnown RBP12.58□□□□□ -0.39
KARS-204ENST00000564578 FERMT1Q9BQL6 677 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 TDRD1Q9BXT4 1180 aaKnown RBP12.58□□□□□ -0.39
KARS-204ENST00000564578 GBA3Q9H227 469 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 ZSCAN32Q9NX65 697 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 DKK3Q9UBP4 350 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 MBD1Q9UIS9 605 aaPredicted RBP12.58□□□□□ -0.39
KARS-204ENST00000564578 CYP8B1Q9UNU6 501 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 NEU2Q9Y3R4 380 aa12.58□□□□□ -0.39
KARS-204ENST00000564578 C10orf142B7Z368 130 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 SPINT1O43278 529 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 ZNF500O60304 480 aaPredicted RBP12.58□□□□□ -0.4
KARS-204ENST00000564578 PHF2O75151 1096 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 ZNF189O75820 626 aaPredicted RBP12.58□□□□□ -0.4
KARS-204ENST00000564578 URI1O94763 535 aaPredicted RBP12.58□□□□□ -0.4
KARS-204ENST00000564578 IFNB1P01574 187 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 TIMP2P16035 220 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 PSMB4P28070 264 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 P3H1Q32P28 736 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 TTC31Q49AM3 519 aaPredicted RBP12.58□□□□□ -0.4
KARS-204ENST00000564578 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.58□□□□□ -0.4
KARS-204ENST00000564578 ERN2Q76MJ5 926 aaKnown RBP12.58□□□□□ -0.4
KARS-204ENST00000564578 FAM124AQ86V42 546 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 KLHDC8BQ8IXV7 354 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 ATL2Q8NHH9 583 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 HCAR2Q8TDS4 363 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 OMDQ99983 421 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 DDX47Q9H0S4 455 aaKnown RBP12.58□□□□□ -0.4
KARS-204ENST00000564578 HAUS2Q9NVX0 235 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 WSB2Q9NYS7 404 aaPredicted RBP12.58□□□□□ -0.4
KARS-204ENST00000564578 CDC23Q9UJX2 597 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 FZD4Q9ULV1 537 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 PCDHB9Q9Y5E1 797 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 RAI2Q9Y5P3 530 aa12.58□□□□□ -0.4
KARS-204ENST00000564578 DNAH14Q0VDD8 3507 aa12.57□□□□□ -0.4
KARS-204ENST00000564578 GOLGA6L10A0A0M3HER8 536 aa12.57□□□□□ -0.4
KARS-204ENST00000564578 ESPNB1AK53 854 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms