RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 KRT37O76014 449 aa25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 LDOC1O95751 146 aaPredicted RBP25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 RARAP10276 462 aa25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 HCAR3P49019 387 aa25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 SLC25A11Q02978 314 aaKnown RBP25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 SGCGQ13326 291 aa25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 KYAT3Q6YP21 454 aaKnown RBP25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 NIPA2Q8N8Q9 360 aa25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 TSEN2Q8NCE0 465 aaKnown RBP25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 KLF6Q99612 283 aaPredicted RBP25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 WRAP53Q9BUR4 548 aaKnown RBP25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 IP6K2Q9UHH9 426 aa25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 NENFQ9UMX5 172 aa25.58■■□□□ 1.69
AC009041.3-201ENST00000564390 FAM221BA6H8Z2 402 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 PALMO75781 387 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 TIMP2P16035 220 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 AMPD1P23109 780 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 ARL4AP40617 200 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 ZNF135P52742 658 aaPredicted RBP25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 ZNF542PQ5EBM4 170 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 SPECC1LQ69YQ0 1117 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 CPNE8Q86YQ8 564 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 CSPG4P5Q96PW8 444 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 CINPQ9BW66 212 aaPredicted RBP25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 CPEB1Q9BZB8 566 aaKnown RBP25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 KLHL11Q9NVR0 708 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 UCKL1Q9NWZ5 548 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 DKK3Q9UBP4 350 aa25.57■■□□□ 1.68
AC009041.3-201ENST00000564390 CBFA2T2O43439 604 aa25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 MMP20O60882 483 aa25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 SSR1P43307 286 aaKnown RBP25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 BOLA3Q53S33 107 aa25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 DHRS13Q6UX07 377 aa25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 POLNQ7Z5Q5 900 aa25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 ZNF564Q8TBZ8 553 aaPredicted RBP25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 CXorf40AQ8TE69 158 aa25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 ZCCHC14Q8WYQ9 949 aaKnown RBP25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 PACSIN1Q9BY11 444 aa25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 PCDH18Q9HCL0 1135 aa25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 IPO11Q9UI26 975 aaKnown RBP25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 HS3ST3A1Q9Y663 406 aa25.56■■□□□ 1.68
AC009041.3-201ENST00000564390 FPGTO14772 594 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 BUB1BO60566 1050 aaPredicted RBP25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 XPAP23025 273 aaPredicted RBP25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 HNRNPH3P31942 346 aaKnown RBP25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 GJC1P36383 396 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 IL10RBQ08334 325 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 TPRG1LQ5T0D9 272 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 TMCO3Q6UWJ1 677 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 ZSCAN30Q86W11 494 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 CAMK1DQ8IU85 385 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 TEKT4Q8WW24 435 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 SUV39H2Q9H5I1 410 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 GPR27Q9NS67 375 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 DNAJC28Q9NX36 388 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 ZMIZ1Q9ULJ6 1067 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 PLXNB3Q9ULL4 1909 aa25.55■■□□□ 1.68
AC009041.3-201ENST00000564390 WDFY3Q8IZQ1 3526 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 IGF2RP11717 2491 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 FAM149AA5PLN7 773 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 MYO1FO00160 1098 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 MUSKO15146 869 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 FFAR2O15552 330 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 PRKCGP05129 697 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 DGKAP23743 735 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 IGFALSP35858 605 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 CLDN6P56747 220 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 SEMG2Q02383 582 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 FZD2Q14332 565 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 CFAP58Q5T655 872 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 CCNI2Q6ZMN8 369 aaPredicted RBP25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 SRLQ86TD4 932 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 ZSWIM9Q86XI8 627 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 SLC25A45Q8N413 288 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 LENG8Q96PV6 779 aaPredicted RBP25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 DNAJC7Q99615 494 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 PCDH12Q9NPG4 1184 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 COQ6Q9Y2Z9 468 aa25.54■■□□□ 1.68
AC009041.3-201ENST00000564390 ANKRD36A6QL64 1941 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 TSPAN11A1L157 253 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 TRIM38O00635 465 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 PIAS2O75928 621 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 RABIFP47224 123 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 ACADVLP49748 655 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 TRIM14Q14142 442 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 KRT81Q14533 505 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 TMPRSS7Q7RTY8 843 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 LZTR1Q8N653 840 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 KDF1Q8NAX2 398 aaPredicted RBP25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 DENND6BQ8NEG7 585 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 CTTNBP2NLQ9P2B4 639 aa25.53■■□□□ 1.68
AC009041.3-201ENST00000564390 TMEM8BA6NDV4 472 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 TM7SF2O76062 418 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 CD48P09326 243 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 CDH6P55285 790 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 SLC10A7Q0GE19 358 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 MMRN1Q13201 1228 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 PDE1CQ14123 709 aaPredicted RBP25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 GRM3Q14832 879 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 SLC18A3Q16572 532 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms