RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 APRTP07741 180 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 MMP2P08253 660 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 SERPINF2P08697 491 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 CD86P42081 329 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 KIR2DL1P43626 348 aaPredicted RBP13.06□□□□□ -0.32
SPG7-209ENST00000564047 RECQLP46063 649 aaPredicted RBP13.06□□□□□ -0.32
SPG7-209ENST00000564047 LMAN1P49257 510 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 CARSP49589 748 aaKnown RBP13.06□□□□□ -0.32
SPG7-209ENST00000564047 PLTPP55058 493 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 DMTNQ08495 405 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 ENPP2Q13822 863 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 ZNF234Q14588 700 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 FBXO43Q4G163 708 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 FNDC3BQ53EP0 1204 aaKnown RBP13.06□□□□□ -0.32
SPG7-209ENST00000564047 KCTD11Q693B1 232 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 NCEH1Q6PIU2 408 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 KDELC1Q6UW63 502 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 ZDHHC24Q6UX98 284 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 CCNI2Q6ZMN8 369 aaPredicted RBP13.06□□□□□ -0.32
SPG7-209ENST00000564047 SRLQ86TD4 932 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 UBALD2Q8IYN6 164 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 PDCD7Q8N8D1 485 aaKnown RBP13.06□□□□□ -0.32
SPG7-209ENST00000564047 MCUQ8NE86 351 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 IFT81Q8WYA0 676 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.06□□□□□ -0.32
SPG7-209ENST00000564047 PRCCQ92733 491 aaPredicted RBP13.06□□□□□ -0.32
SPG7-209ENST00000564047 RBM15Q96T37 977 aaKnown RBP eCLIP13.06□□□□□ -0.32
SPG7-209ENST00000564047 FRMD8Q9BZ67 464 aaPredicted RBP13.06□□□□□ -0.32
SPG7-209ENST00000564047 TM6SF2Q9BZW4 377 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 TNKS2Q9H2K2 1166 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 TMEM245Q9H330 911 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 LRRC40Q9H9A6 602 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 NOD2Q9HC29 1040 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 ZDHHC18Q9NUE0 388 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 HCN2Q9UL51 889 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.05□□□□□ -0.32
SPG7-209ENST00000564047 TCRBV7S3A2A0A539 114 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 TTC24A2A3L6 582 aaPredicted RBP13.05□□□□□ -0.32
SPG7-209ENST00000564047 WASH3PC4AMC7 463 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 TMEM63AO94886 807 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 MT-CYBP00156 380 aaPredicted RBP13.05□□□□□ -0.32
SPG7-209ENST00000564047 EGFP01133 1207 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 CHRM1P11229 460 aaPredicted RBP13.05□□□□□ -0.32
SPG7-209ENST00000564047 ECHS1P30084 290 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 SARNPP82979 210 aaKnown RBP13.05□□□□□ -0.32
SPG7-209ENST00000564047 HLTFQ14527 1009 aaKnown RBP eCLIP13.05□□□□□ -0.32
SPG7-209ENST00000564047 IHHQ14623 411 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 CASP8Q14790 479 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 GRM3Q14832 879 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 TERF2Q15554 542 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 MYLK3Q32MK0 819 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 HNRNPA1L2Q32P51 320 aaKnown RBP13.05□□□□□ -0.32
SPG7-209ENST00000564047 ATXN7L2Q5T6C5 722 aaPredicted RBP13.05□□□□□ -0.32
SPG7-209ENST00000564047 EMC10Q5UCC4 262 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 ANKRD22Q5VYY1 191 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 EGFLAMQ63HQ2 1017 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 SERPINA13PQ6UXR4 307 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 PPP1R21Q6ZMI0 780 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 ZNF852Q6ZMS4 543 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 Q6ZVU0 165 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.05□□□□□ -0.32
SPG7-209ENST00000564047 TMEM105Q8N8V8 129 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 OR2A12Q8NGT7 310 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 FBXO25Q8TCJ0 367 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 PTPRN2Q92932 1015 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 TUBGCP5Q96RT8 1024 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 FOXP3Q9BZS1 431 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 ARHGEF3Q9NR81 526 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 UBP1Q9NZI7 540 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 HECAQ9UBI9 543 aaPredicted RBP13.05□□□□□ -0.32
SPG7-209ENST00000564047 SUN2Q9UH99 717 aa13.05□□□□□ -0.32
SPG7-209ENST00000564047 KMT2BQ9UMN6 2715 aaPredicted RBP13.05□□□□□ -0.32
SPG7-209ENST00000564047 EDDM13A0A1B0GTR0 161 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 AP3B1O00203 1094 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 PMPCBO75439 489 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 GJB3O75712 270 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 POP4O95707 220 aaKnown RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 EPOP01588 193 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 CA4P22748 312 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 OAS2P29728 719 aaKnown RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 ADRA1AP35348 466 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 IL12RB1P42701 662 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 CCNHP51946 323 aaPredicted RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 WNT3AP56704 352 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 MRPS21P82921 87 aaKnown RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 RAD51Q06609 339 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 NAPEPLDQ6IQ20 393 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 DPY19L3Q6ZPD9 716 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 DGLUCYQ7Z3D6 616 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 TRMT11Q7Z4G4 463 aaKnown RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 LINC00523Q86TU6 105 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 CHPFQ8IZ52 775 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 RYBPQ8N488 228 aaPredicted RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 ZCCHC9Q8N567 271 aaKnown RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 ZNF513Q8N8E2 541 aaPredicted RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 IPMKQ8NFU5 416 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 SHDQ96IW2 340 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 MRGPRX2Q96LB1 330 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 NSMCE3Q96MG7 304 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 HEPHQ9BQS7 1158 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms