RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 ARHGAP42A6NI28 874 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 SCAMP1O15126 338 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 RAD51BO15315 384 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 PRAMEF11O60813 436 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 FTLP02792 175 aaPredicted RBP25.48■■□□□ 1.67
SPG7-208ENST00000563783 CKMT1AP12532 417 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 GKP32189 559 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 CSNK1DP48730 415 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 PFN3P60673 137 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 YPEL5P62699 121 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 KLHL30Q0D2K2 578 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 ELP6Q0PNE2 266 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 NR1I3Q14994 352 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 TTC7BQ86TV6 843 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 CENPTQ96BT3 561 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 TUBGCP5Q96RT8 1024 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 NRSN2Q9GZP1 204 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 MRPL47Q9HD33 250 aaKnown RBP25.48■■□□□ 1.67
SPG7-208ENST00000563783 NCKIPSDQ9NZQ3 722 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 LHX3Q9UBR4 397 aa25.48■■□□□ 1.67
SPG7-208ENST00000563783 BZW2Q9Y6E2 419 aaKnown RBP25.48■■□□□ 1.67
SPG7-208ENST00000563783 FAM149AA5PLN7 773 aa25.47■■□□□ 1.67
SPG7-208ENST00000563783 EEF2KO00418 725 aaKnown RBP25.47■■□□□ 1.67
SPG7-208ENST00000563783 GP1BAP07359 652 aa25.47■■□□□ 1.67
SPG7-208ENST00000563783 GIMD1P0DJR0 217 aa25.47■■□□□ 1.67
SPG7-208ENST00000563783 HES3Q5TGS1 186 aa25.47■■□□□ 1.67
SPG7-208ENST00000563783 AFMIDQ63HM1 303 aa25.47■■□□□ 1.67
SPG7-208ENST00000563783 LEKR1Q6ZMV7 388 aa25.47■■□□□ 1.67
SPG7-208ENST00000563783 SYN2Q92777 582 aaPredicted RBP25.47■■□□□ 1.67
SPG7-208ENST00000563783 ZNF641Q96N77 438 aaPredicted RBP25.47■■□□□ 1.67
SPG7-208ENST00000563783 ISCUQ9H1K1 167 aa25.47■■□□□ 1.67
SPG7-208ENST00000563783 UCKL1Q9NWZ5 548 aa25.47■■□□□ 1.67
SPG7-208ENST00000563783 ASXL3Q9C0F0 2248 aa25.47■■□□□ 1.67
SPG7-208ENST00000563783 ATRXP46100 2492 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 IGSF10Q6WRI0 2623 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 A0A1W2PQJ5 194 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 DDX3XO00571 662 aaKnown RBP eCLIP25.46■■□□□ 1.671e-13■■■■□ 20.2
SPG7-208ENST00000563783 PRPSAP2O60256 369 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 PCK1P35558 622 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 DUSP3P51452 185 aaPredicted RBP25.46■■□□□ 1.67
SPG7-208ENST00000563783 PTK2BQ14289 1009 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 TMEM52BQ4KMG9 183 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 E4F1Q66K89 784 aaPredicted RBP25.46■■□□□ 1.67
SPG7-208ENST00000563783 BRAT1Q6PJG6 821 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 RFX8Q6ZV50 586 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 LZTR1Q8N653 840 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 ARFGAP1Q8N6T3 406 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 BTN2A2Q8WVV5 523 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 NAP1L5Q96NT1 182 aaPredicted RBP25.46■■□□□ 1.67
SPG7-208ENST00000563783 SNRNP25Q9BV90 132 aaKnown RBP25.46■■□□□ 1.67
SPG7-208ENST00000563783 DHX35Q9H5Z1 703 aaKnown RBP25.46■■□□□ 1.67
SPG7-208ENST00000563783 DNAJC28Q9NX36 388 aa25.46■■□□□ 1.67
SPG7-208ENST00000563783 CNOT8Q9UFF9 292 aaKnown RBP25.46■■□□□ 1.67
SPG7-208ENST00000563783 TMCO5BA8MYB1 307 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 TPP1O14773 563 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 TM7SF2O76062 418 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 TPM4P67936 248 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 CYP4F3Q08477 520 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 RFTN1Q14699 578 aaPredicted RBP25.45■■□□□ 1.66
SPG7-208ENST00000563783 RTP5Q14D33 572 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 AGERQ15109 404 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 CYTH1Q15438 398 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 CYP4V2Q6ZWL3 525 aaPredicted RBP25.45■■□□□ 1.66
SPG7-208ENST00000563783 DCBLD1Q8N8Z6 715 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 ZNF548Q8NEK5 533 aaPredicted RBP25.45■■□□□ 1.66
SPG7-208ENST00000563783 CXorf40AQ8TE69 158 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 IPO11Q9UI26 975 aaKnown RBP25.45■■□□□ 1.66
SPG7-208ENST00000563783 GGT7Q9UJ14 662 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 ITM2BQ9Y287 266 aa25.45■■□□□ 1.66
SPG7-208ENST00000563783 ATMINO43313 823 aaPredicted RBP25.44■■□□□ 1.66
SPG7-208ENST00000563783 SERPINC1P01008 464 aa25.44■■□□□ 1.66
SPG7-208ENST00000563783 TIMP2P16035 220 aa25.44■■□□□ 1.66
SPG7-208ENST00000563783 MIPP30301 263 aa25.44■■□□□ 1.66
SPG7-208ENST00000563783 DAB2P98082 770 aa25.44■■□□□ 1.66
SPG7-208ENST00000563783 PDE1CQ14123 709 aaPredicted RBP25.44■■□□□ 1.66
SPG7-208ENST00000563783 ZCCHC8Q6NZY4 707 aaKnown RBP25.44■■□□□ 1.66
SPG7-208ENST00000563783 ZNF653Q96CK0 615 aa25.44■■□□□ 1.66
SPG7-208ENST00000563783 PEBP4Q96S96 227 aa25.44■■□□□ 1.66
SPG7-208ENST00000563783 SUV39H2Q9H5I1 410 aa25.44■■□□□ 1.66
SPG7-208ENST00000563783 LHX6Q9UPM6 363 aa25.44■■□□□ 1.66
SPG7-208ENST00000563783 A0A087WV48 116 aa25.43■■□□□ 1.66
SPG7-208ENST00000563783 CFAP69A5D8W1 941 aa25.43■■□□□ 1.66
SPG7-208ENST00000563783 LRCH4O75427 683 aa25.43■■□□□ 1.66
SPG7-208ENST00000563783 NSUN2Q08J23 767 aaKnown RBP eCLIP25.43■■□□□ 1.66
SPG7-208ENST00000563783 TARDBPQ13148 414 aaKnown RBP eCLIP25.43■■□□□ 1.66
SPG7-208ENST00000563783 KLHL40Q2TBA0 621 aa25.43■■□□□ 1.66
SPG7-208ENST00000563783 TMCO4Q5TGY1 634 aa25.43■■□□□ 1.66
SPG7-208ENST00000563783 SPOCK2Q92563 424 aa25.43■■□□□ 1.66
SPG7-208ENST00000563783 APOLD1Q96LR9 279 aa25.43■■□□□ 1.66
SPG7-208ENST00000563783 CLCA2Q9UQC9 943 aa25.43■■□□□ 1.66
SPG7-208ENST00000563783 TMEM110-MUSTN1A8MSY1 372 aa25.42■■□□□ 1.66
SPG7-208ENST00000563783 K7ESM1 405 aa25.42■■□□□ 1.66
SPG7-208ENST00000563783 FFAR2O15552 330 aa25.42■■□□□ 1.66
SPG7-208ENST00000563783 DAPK3O43293 454 aa25.42■■□□□ 1.66
SPG7-208ENST00000563783 LZTS3O60299 673 aaPredicted RBP25.42■■□□□ 1.66
SPG7-208ENST00000563783 ERCC2P18074 760 aa25.42■■□□□ 1.66
SPG7-208ENST00000563783 XPAP23025 273 aaPredicted RBP25.42■■□□□ 1.66
SPG7-208ENST00000563783 IGFALSP35858 605 aa25.42■■□□□ 1.66
SPG7-208ENST00000563783 PEX5P50542 639 aa25.42■■□□□ 1.66
SPG7-208ENST00000563783 THOP1P52888 689 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms