RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 FAM131BQ86XD5 332 aa15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 FBXO39Q8N4B4 442 aa15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 ATL2Q8NHH9 583 aa15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 TMEM159Q96B96 161 aa15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 CFAP57Q96MR6 1250 aa15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 GDAP1L1Q96MZ0 367 aa15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 TMEM74Q96NL1 305 aa15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 GFM1Q96RP9 751 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 FAM117AQ9C073 453 aa15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 TMEM248Q9NWD8 314 aa15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 DKK3Q9UBP4 350 aa15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 HEMK1Q9Y5R4 338 aaPredicted RBP15.96■□□□□ 0.15
HERPUD1-205ENST00000562914 RAMP2O60895 175 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 CCKBRP32239 447 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 CSRP3P50461 194 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 HK3P52790 923 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 ELP6Q0PNE2 266 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 C1orf61Q13536 156 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 MAN2A1Q16706 1144 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 INO80DQ53TQ3 878 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 RAB11FIP2Q7L804 512 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 NLRP14Q86W24 1093 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 GKN2Q86XP6 184 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 FAM114A1Q8IWE2 563 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 OR6K2Q8NGY2 324 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 HCAR2Q8TDS4 363 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 KLHL32Q96NJ5 620 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 EPAS1Q99814 870 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 EDEM3Q9BZQ6 932 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 CLPBQ9H078 707 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 TCEAL2Q9H3H9 227 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 SEPT10Q9P0V9 454 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 GGT7Q9UJ14 662 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 ITM2BQ9Y287 266 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 MFHAS1Q9Y4C4 1052 aa15.95■□□□□ 0.14
HERPUD1-205ENST00000562914 D6RAR5 112 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 NVLO15381 856 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 RASGRP1O95267 797 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 CTSEP14091 401 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 SLC5A2P31639 672 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 ADRA1BP35368 520 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 ACVRL1P37023 503 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 GRM3Q14832 879 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 DRAP1Q14919 205 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 RWDD4Q6NW29 188 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 TP53I13Q8NBR0 393 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 SGF29Q96ES7 293 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 TTYH3Q9C0H2 523 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 SYNDIG1Q9H7V2 258 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 KIAA1468Q9P260 1216 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 AJAP1Q9UKB5 411 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 MYO18BQ8IUG5 2567 aa15.94■□□□□ 0.14
HERPUD1-205ENST00000562914 GOLGA8SH3BPF8 625 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 ARHGAP6O43182 974 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 KDELR3O43731 214 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 MMP20O60882 483 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 IGSF6O95976 241 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 LIPCP11150 499 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 SDC4P31431 198 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 GKP32189 559 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 UGT1A5P35504 534 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 RAPGEF1Q13905 1077 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 LRRC14Q15048 493 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 AGERQ15109 404 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 TPD52L1Q16890 204 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 KLHL40Q2TBA0 621 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 TMEM52BQ4KMG9 183 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 USP53Q70EK8 1073 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 STRADAQ7RTN6 431 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 ZNF677Q86XU0 584 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 IRF2BP1Q8IU81 584 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 MLKLQ8NB16 471 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 PCDH19Q8TAB3 1148 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 CCDC74AQ96AQ1 378 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 VOPP1Q96AW1 172 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 TBC1D31Q96DN5 1066 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 ARHGAP9Q9BRR9 750 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 CPEB1Q9BZB8 566 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 NDST4Q9H3R1 872 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 EPB41L5Q9HCM4 733 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 GULP1Q9UBP9 304 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 DNAI1Q9UI46 699 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 PNMA8BQ9ULN7 279 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 ACTL7AQ9Y615 435 aa15.93■□□□□ 0.14
HERPUD1-205ENST00000562914 PMS2P1A4D2B8 440 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 JMJD7P0C870 316 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 PNMA6AP0CW24 399 aaPredicted RBP15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 PNLIPP16233 465 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 XPAP23025 273 aaPredicted RBP15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 PTPN9P43378 593 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 NOMO3P69849 1222 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 ATP11AP98196 1134 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 BECN1Q14457 450 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 TRNP1Q6NT89 227 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 PRICKLE2Q7Z3G6 844 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 HID1Q8IV36 788 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 KYQ8NBH2 561 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 SEMA3CQ99985 751 aa15.92■□□□□ 0.14
HERPUD1-205ENST00000562914 B3GNT4Q9C0J1 378 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms