RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 APOLD1Q96LR9 279 aa16.99■□□□□ 0.31
TNRC6A-209ENST00000562829 WRAP53Q9BUR4 548 aaKnown RBP16.99■□□□□ 0.31
TNRC6A-209ENST00000562829 SNRNP25Q9BV90 132 aaKnown RBP16.99■□□□□ 0.31
TNRC6A-209ENST00000562829 DUSP23Q9BVJ7 150 aa16.99■□□□□ 0.31
TNRC6A-209ENST00000562829 C1QTNF7Q9BXJ2 289 aa16.99■□□□□ 0.31
TNRC6A-209ENST00000562829 LHX3Q9UBR4 397 aa16.99■□□□□ 0.31
TNRC6A-209ENST00000562829 CNOT8Q9UFF9 292 aaKnown RBP16.99■□□□□ 0.31
TNRC6A-209ENST00000562829 MFHAS1Q9Y4C4 1052 aa16.99■□□□□ 0.31
TNRC6A-209ENST00000562829 URB1O60287 2271 aaKnown RBP16.99■□□□□ 0.31
TNRC6A-209ENST00000562829 K7ESM1 405 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 SCAMP1O15126 338 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 PRPSAP2O60256 369 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 SERPINC1P01008 464 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 CSF2P04141 144 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 MYF5P13349 255 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 NME1P15531 152 aaKnown RBP16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 JUNDP17535 347 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 ITIH2P19823 946 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 IGFALSP35858 605 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 DUSP3P51452 185 aaPredicted RBP16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 KLHL30Q0D2K2 578 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 CYTH1Q15438 398 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 CA9Q16790 459 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 PPP6R3Q5H9R7 873 aaPredicted RBP16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 ERMARDQ5T6L9 678 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 ZNF571Q7Z3V5 609 aaPredicted RBP16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 PAF1Q8N7H5 531 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 LMX1AQ8TE12 382 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 VOPP1Q96AW1 172 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 DKK3Q9UBP4 350 aa16.98■□□□□ 0.31
TNRC6A-209ENST00000562829 A0A1W2PQC6 194 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 ARHGAP42A6NI28 874 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 EIF3CLB5ME19 914 aaKnown RBP16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 J3KR12 359 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 AQP9O43315 295 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 MT-CO3P00414 261 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 FTLP02792 175 aaPredicted RBP16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 GIMD1P0DJR0 217 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 CKMT1AP12532 417 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 TIMP2P16035 220 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 NDST2P52849 883 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 PFN3P60673 137 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 ELP6Q0PNE2 266 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 PTK2BQ14289 1009 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 KLHL40Q2TBA0 621 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 TPRG1LQ5T0D9 272 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 E4F1Q66K89 784 aaPredicted RBP16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 PDZD3Q86UT5 571 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 RFFLQ8WZ73 363 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 PEBP4Q96S96 227 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 KCTD15Q96SI1 283 aaPredicted RBP16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 EIF3CQ99613 913 aaKnown RBP16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 CPEB1Q9BZB8 566 aaKnown RBP16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 SLC39A8Q9C0K1 460 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 NRSN2Q9GZP1 204 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 LRRC19Q9H756 370 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 SP110Q9HB58 689 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 PDFQ9HBH1 243 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 SCUBE2Q9NQ36 999 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 AIPL1Q9NZN9 384 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 MYO1AQ9UBC5 1043 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 SCINQ9Y6U3 715 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 CACNA1GO43497 2377 aa16.97■□□□□ 0.31
TNRC6A-209ENST00000562829 ZFYVE26Q68DK2 2539 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 A0A1B0GTH6 734 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 TMEM191CA6NGB0 347 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 DFFAO00273 331 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 PRAMEF11O60813 436 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 PALMO75781 387 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 GZMAP12544 262 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 SKILP12757 684 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 MIPP30301 263 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 PRKCIP41743 596 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 PAPOLAP51003 745 aaKnown RBP16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 EIF2B5Q13144 721 aaKnown RBP16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 GRM3Q14832 879 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 DEFB133Q30KQ1 61 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 TDRD12Q587J7 1177 aaKnown RBP16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 ZCCHC8Q6NZY4 707 aaKnown RBP16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 RFX8Q6ZV50 586 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 RBFAQ8N0V3 343 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 BTN2A2Q8WVV5 523 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 CENPTQ96BT3 561 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 NAP1L5Q96NT1 182 aaPredicted RBP16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 IL12RB2Q99665 862 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 CINPQ9BW66 212 aaPredicted RBP16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 TRIM7Q9C029 511 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 ABCG4Q9H172 646 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 SUV39H2Q9H5I1 410 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 SPASTQ9UBP0 616 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 APOBEC3BQ9UH17 382 aaKnown RBP16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 KLF15Q9UIH9 416 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 COQ6Q9Y2Z9 468 aa16.96■□□□□ 0.31
TNRC6A-209ENST00000562829 DDX3XO00571 662 aaKnown RBP eCLIP16.95■□□□□ 0.3
TNRC6A-209ENST00000562829 HOXB3P14651 431 aaPredicted RBP16.95■□□□□ 0.3
TNRC6A-209ENST00000562829 ERCC2P18074 760 aa16.95■□□□□ 0.3
TNRC6A-209ENST00000562829 SUOXP51687 545 aa16.95■□□□□ 0.3
TNRC6A-209ENST00000562829 TPM4P67936 248 aa16.95■□□□□ 0.3
TNRC6A-209ENST00000562829 IRF4Q15306 451 aa16.95■□□□□ 0.3
TNRC6A-209ENST00000562829 UGP2Q16851 508 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms