RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 VPS39Q96JC1 886 aa16.72■□□□□ 0.27
PKD1-225ENST00000562297 SNX15Q9NRS6 342 aa16.72■□□□□ 0.27
PKD1-225ENST00000562297 NSMCE4AQ9NXX6 385 aa16.72■□□□□ 0.27
PKD1-225ENST00000562297 DNMT3BQ9UBC3 853 aaKnown RBP16.72■□□□□ 0.27
PKD1-225ENST00000562297 GGT7Q9UJ14 662 aa16.72■□□□□ 0.27
PKD1-225ENST00000562297 EMCNQ9ULC0 261 aa16.72■□□□□ 0.27
PKD1-225ENST00000562297 PHTF1Q9UMS5 762 aa16.72■□□□□ 0.27
PKD1-225ENST00000562297 MTO1Q9Y2Z2 717 aaKnown RBP16.72■□□□□ 0.27
PKD1-225ENST00000562297 C5orf42Q9H799 3197 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 PRRC2BQ5JSZ5 2229 aaKnown RBP16.71■□□□□ 0.27
PKD1-225ENST00000562297 GSRP00390 522 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 HLA-DPA1P20036 260 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 PPM1JQ5JR12 505 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 MICALCLQ6ZW33 695 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 CMC1Q7Z7K0 106 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 DENND6AQ8IWF6 608 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 ARMC2Q8NEN0 867 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 TCEAL4Q96EI5 215 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 EXOC2Q96KP1 924 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 GCNAQ96QF7 691 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 MAN1C1Q9NR34 630 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 ARHGAP26Q9UNA1 814 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 ZNF510Q9Y2H8 683 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 STARD13Q9Y3M8 1113 aa16.71■□□□□ 0.27
PKD1-225ENST00000562297 USP15Q9Y4E8 981 aaPredicted RBP16.71■□□□□ 0.27
PKD1-225ENST00000562297 LEFTY2O00292 366 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 INSIG1O15503 277 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 TIMM44O43615 452 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 LDB2O43679 373 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 AHSGP02765 367 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 PRKCGP05129 697 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 FGF1P05230 155 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 SERPINB8P50452 374 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 LINGO4Q6UY18 593 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 SPATA21Q7Z572 469 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 YTHDF3Q7Z739 585 aaKnown RBP16.7■□□□□ 0.26
PKD1-225ENST00000562297 TDRD5Q8NAT2 981 aaKnown RBP16.7■□□□□ 0.26
PKD1-225ENST00000562297 GRAMD1AQ96CP6 724 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 GPR22Q99680 433 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 SMG9Q9H0W8 520 aaKnown RBP16.7■□□□□ 0.26
PKD1-225ENST00000562297 RHOJQ9H4E5 214 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 MANSC1Q9H8J5 431 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 HAUS2Q9NVX0 235 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 CCL26Q9Y258 94 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 TYW5A2RUC4 315 aaKnown RBP16.7■□□□□ 0.26
PKD1-225ENST00000562297 TMCC1O94876 653 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 EPCAMP16422 314 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 PAMP19021 973 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 TYK2P29597 1187 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 GMPRP36959 345 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 CSKP41240 450 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 LIG3P49916 1009 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 GALNT3Q14435 633 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 MPP7Q5T2T1 576 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 FAM109BQ6ICB4 259 aaPredicted RBP16.7■□□□□ 0.26
PKD1-225ENST00000562297 TTC16Q8NEE8 873 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 RIN3Q8TB24 985 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 BHMTQ93088 406 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 IFT43Q96FT9 208 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 MTIF3Q9H2K0 278 aaKnown RBP16.7■□□□□ 0.26
PKD1-225ENST00000562297 SIRPGQ9P1W8 387 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 SH3BP1Q9Y3L3 701 aa16.7■□□□□ 0.26
PKD1-225ENST00000562297 GRXCR1A8MXD5 290 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 CLASP2O75122 1294 aaKnown RBP16.69■□□□□ 0.26
PKD1-225ENST00000562297 GLRA3O75311 464 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 KIAA0754O94854 1291 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 NDST3O95803 873 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 PRLP01236 227 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 HOXA9P31269 272 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 SLC1A2P43004 574 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 SCNN1BP51168 640 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 MPP1Q00013 466 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 CTBP1Q13363 440 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 CDH18Q13634 790 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 SLC5A9Q2M3M2 681 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 INO80DQ53TQ3 878 aaPredicted RBP16.69■□□□□ 0.26
PKD1-225ENST00000562297 KYAT3Q6YP21 454 aaKnown RBP16.69■□□□□ 0.26
PKD1-225ENST00000562297 OTOAQ7RTW8 1153 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 CLEC14AQ86T13 490 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 ANKS4BQ8N8V4 417 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 C2CD4AQ8NCU7 369 aaPredicted RBP16.69■□□□□ 0.26
PKD1-225ENST00000562297 MICAL1Q8TDZ2 1067 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 MECRQ9BV79 373 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 CAB39LQ9H9S4 337 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 LHX3Q9UBR4 397 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 VPS51Q9UID3 782 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 VPS28Q9UK41 221 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 CLEC4EQ9ULY5 219 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 KLF11O14901 512 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 RB1P06400 928 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 PTPN2P17706 415 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 BGNP21810 368 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 ACVR1Q04771 509 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 GRM3Q14832 879 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 DLG2Q15700 870 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 INSCQ1MX18 579 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 GPR158Q5T848 1215 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 CES4AQ5XG92 561 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 RNF135Q8IUD6 432 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 MFN1Q8IWA4 741 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms