RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 AADATQ8N5Z0 425 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 FRMD1Q8N878 549 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 C12orf50Q8NA57 414 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 SPATA22Q8NHS9 363 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 KIF18AQ8NI77 898 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 CCDC110Q8TBZ0 833 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 HCAR2Q8TDS4 363 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 GANCQ8TET4 914 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 RLN3Q8WXF3 142 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 ARRDC3Q96B67 414 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 IMP4Q96G21 291 aaKnown RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 ZNF641Q96N77 438 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 RBM15Q96T37 977 aaKnown RBP eCLIP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 OMDQ99983 421 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 TMEM121BQ9BXQ6 578 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 OSBPL1AQ9BXW6 950 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 FAM126AQ9BYI3 521 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 SLC25A51Q9H1U9 297 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 NEUROG2Q9H2A3 272 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 PABPC3Q9H361 631 aaKnown RBP10.39□□□□□ -0.75
LRRC28-221ENST00000561276 ATP13A3Q9H7F0 1226 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 FBXL12Q9NXK8 326 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 CDC23Q9UJX2 597 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 INVSQ9Y283 1065 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 NCKAP1Q9Y2A7 1128 aa10.39□□□□□ -0.75
LRRC28-221ENST00000561276 A0A1W2PP55 124 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 C16orf96A6NNT2 1141 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 TRAFD1O14545 582 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-221ENST00000561276 ZNF500O60304 480 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-221ENST00000561276 OPHN1O60890 802 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 PHF2O75151 1096 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 ZNF217O75362 1048 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 RNASEH2AO75792 299 aaKnown RBP10.38□□□□□ -0.75
LRRC28-221ENST00000561276 MT-CYBP00156 380 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-221ENST00000561276 IFNB1P01574 187 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 DRD3P35462 400 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 ACTN2P35609 894 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 CD86P42081 329 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 SKOR1P84550 965 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 CNTN1Q12860 1018 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 TTC31Q49AM3 519 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-221ENST00000561276 USP39Q53GS9 565 aaKnown RBP10.38□□□□□ -0.75
LRRC28-221ENST00000561276 FBXL19Q6PCT2 694 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 ARHGEF18Q6ZSZ5 1173 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 USP30Q70CQ3 517 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 PRUNE1Q86TP1 453 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 TTC7BQ86TV6 843 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 FAM124AQ86V42 546 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 KBTBD6Q86V97 674 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 WDR5BQ86VZ2 330 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 LONP2Q86WA8 852 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 GLIS1Q8NBF1 620 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 PDCD6IPQ8WUM4 868 aaKnown RBP10.38□□□□□ -0.75
LRRC28-221ENST00000561276 NELL1Q92832 810 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 RTP4Q96DX8 246 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 PPP1R16AQ96I34 528 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 SPATA13Q96N96 652 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 FCRL5Q96RD9 977 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 DDX47Q9H0S4 455 aaKnown RBP10.38□□□□□ -0.75
LRRC28-221ENST00000561276 CD93Q9NPY3 652 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 DYRK4Q9NR20 520 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 UBP1Q9NZI7 540 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 USP36Q9P275 1121 aaKnown RBP10.38□□□□□ -0.75
LRRC28-221ENST00000561276 SERGEFQ9UGK8 458 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 RSPH14Q9UHP6 348 aa10.38□□□□□ -0.75
LRRC28-221ENST00000561276 FEZ2Q9UHY8 353 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-221ENST00000561276 F5H423 210 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-221ENST00000561276 H0Y858 1186 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 CCDC188H7C350 402 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 HTRA2O43464 458 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-221ENST00000561276 METTL18O95568 372 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 IGLV3-19P01714 112 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 PDHA1P08559 390 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 ZSCAN5DPP0CG00 497 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 TIMP2P16035 220 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 ITGB7P26010 798 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 OXTRP30559 389 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 P2RY2P41231 377 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 POLR2LP62875 67 aaKnown RBP10.37□□□□□ -0.75
LRRC28-221ENST00000561276 CCDC15Q0P6D6 951 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 TRAF2Q12933 501 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 TUBB2AQ13885 445 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 PCSK7Q16549 785 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 UGP2Q16851 508 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 KCTD19Q17RG1 926 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-221ENST00000561276 PARP6Q2NL67 630 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 P3H1Q32P28 736 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 MAP7D1Q3KQU3 841 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 CFAP58Q5T655 872 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 ITPRIPL1Q6GPH6 555 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 ERN2Q76MJ5 926 aaKnown RBP10.37□□□□□ -0.75
LRRC28-221ENST00000561276 KDELC2Q7Z4H8 507 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 KLHL7Q8IXQ5 586 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 FAM160A2Q8N612 972 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-221ENST00000561276 PAF1Q8N7H5 531 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 CCDC89Q8N998 374 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 TADA1Q96BN2 335 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 PRRX2Q99811 253 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 TUBB2BQ9BVA1 445 aa10.37□□□□□ -0.75
LRRC28-221ENST00000561276 HDAC8Q9BY41 377 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms