RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	STC2	O76061	302 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	NOL4	O94818	638 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	YEATS4	O95619	227 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	CSH1	P0DML2	217 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	CSH2	P0DML3	217 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	TGM1	P22735	817 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	BDNF	P23560	247 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	ME1	P48163	572 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	LHX1	P48742	406 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	CASP4	P49662	377 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	CCR3	P51677	355 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	RPL10A	P62906	217 aa	Known RBP	7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	SMARCB1	Q12824	385 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	MYO1E	Q12965	1108 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	RUNX3	Q13761	415 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	GRM7	Q14831	915 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	SNRNP35	Q16560	246 aa	Known RBP	7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	MDH1B	Q5I0G3	518 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	FAM171B	Q6P995	826 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	STXBP4	Q6ZWJ1	553 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	TRAPPC11	Q7Z392	1133 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	TMEM86A	Q8N2M4	240 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	SPEM1	Q8N4L4	309 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	ARL14EP	Q8N8R7	260 aa	Predicted RBP	7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	IQUB	Q8NA54	791 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	ZNF480	Q8WV37	535 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	MRPS31	Q92665	395 aa	Known RBP	7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	HOXB13	Q92826	284 aa	Predicted RBP	7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	SNX21	Q969T3	373 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	MYLPF	Q96A32	169 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	MMS19	Q96T76	1030 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	SYT15	Q9BQS2	421 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	LRRC27	Q9C0I9	530 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	ENKD1	Q9H0I2	346 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	LINC00597	Q9H2U6	94 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	TRPS1	Q9UHF7	1281 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	WNT6	Q9Y6F9	365 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	KIF26A	Q9ULI4	1882 aa	Predicted RBP	7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	ATG2B	Q96BY7	2078 aa		7.47	□□□□□ -1.21
MARK3-223	ENST00000561071	ANTXRL	A6NF34	631 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	CLDN5	O00501	218 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	EGF	P01133	1207 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	HSP90AA1	P07900	732 aa	Known RBP	7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	PF4V1	P10720	104 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	GYPE	P15421	78 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	TNNI1	P19237	187 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	WARS	P23381	471 aa	Known RBP	7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	PCSK1	P29120	753 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	GNL1	P36915	607 aa	Predicted RBP	7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	RPS19	P39019	145 aa	Known RBP	7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	CACNA2D1	P54289	1103 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	ADK	P55263	362 aa	Known RBP	7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	CDH8	P55286	799 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	MYL6	P60660	151 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	CYP24A1	Q07973	514 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	MGAT2	Q10469	447 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	SIM2	Q14190	667 aa	Predicted RBP	7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	PSMD6	Q15008	389 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	UAP1L1	Q3KQV9	507 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	CFAP221	Q4G0U5	840 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	DGKK	Q5KSL6	1271 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	RESP18	Q5W5W9	173 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	UNC13D	Q70J99	1090 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	DGLUCY	Q7Z3D6	616 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	WDR49	Q8IV35	697 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	XXYLT1	Q8NBI6	393 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	OR6B3	Q8NGW1	331 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	HSPBAP1	Q96EW2	488 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	CGRRF1	Q99675	332 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	SNX25	Q9H3E2	840 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	NELFA	Q9H3P2	528 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	CUEDC2	Q9H467	287 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	DPEP3	Q9H4B8	488 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	TMEM30A	Q9NV96	361 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	DUS2	Q9NX74	493 aa	Known RBP	7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	PLA2G3	Q9NZ20	509 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	GCNT4	Q9P109	453 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	ZNF180	Q9UJW8	692 aa		7.46	□□□□□ -1.22
MARK3-223	ENST00000561071	NUP210	Q8TEM1	1887 aa	Predicted RBP	7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	TRAV19	A0A0A6YYK7	116 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	KIAA0391	O15091	583 aa	Known RBP	7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	EIF3D	O15371	548 aa	Known RBP eCLIP	7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	HTRA2	O43464	458 aa	Predicted RBP	7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	KLRC4	O43908	158 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	EXOC3	O60645	756 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	IL33	O95760	270 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	HDC	P19113	662 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	DDX6	P26196	483 aa	Known RBP eCLIP	7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	ECHS1	P30084	290 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	MAGEA11	P43364	429 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	SLC6A9	P48067	706 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	SLC16A1	P53985	500 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	ZXDB	P98169	803 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	GRSF1	Q12849	480 aa	Known RBP eCLIP	7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	FOXL1	Q12952	345 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	STK4	Q13043	487 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	PUM1	Q14671	1186 aa	Known RBP eCLIP	7.45	□□□□□ -1.22	9e-6	■■■■□ 23.7
MARK3-223	ENST00000561071	ICAM4	Q14773	271 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	MTF1	Q14872	753 aa		7.45	□□□□□ -1.22
MARK3-223	ENST00000561071	CCDC6	Q16204	474 aa		7.45	□□□□□ -1.22

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