RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 HNRNPH3P31942 346 aaKnown RBP16.18■□□□□ 0.18
LMX1B-204ENST00000561065 CAMK2BQ13554 666 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 PIGHQ14442 188 aaPredicted RBP16.18■□□□□ 0.18
LMX1B-204ENST00000561065 CYTH1Q15438 398 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 BOLA3Q53S33 107 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 CCDC122Q5T0U0 273 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 ERMARDQ5T6L9 678 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 PTAR1Q7Z6K3 402 aaPredicted RBP16.18■□□□□ 0.18
LMX1B-204ENST00000561065 ARHGAP12Q8IWW6 846 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 MDM1Q8TC05 714 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 KLHL11Q9NVR0 708 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 MYO1AQ9UBC5 1043 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 ACACAQ13085 2346 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 IGLON5A6NGN9 336 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 A6NNZ2 444 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 J3KR12 359 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 RFPL3O75679 317 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 PIGNO95427 931 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 POP4O95707 220 aaKnown RBP16.17■□□□□ 0.18
LMX1B-204ENST00000561065 IGSF6O95976 241 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 GYPCP04921 128 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 DGKAP23743 735 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 RGRP47804 291 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 RHOAP61586 193 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 PROX2Q3B8N5 592 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 INO80DQ53TQ3 878 aaPredicted RBP16.17■□□□□ 0.18
LMX1B-204ENST00000561065 AFMIDQ63HM1 303 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 GDPD4Q6W3E5 623 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 ARHGAP36Q6ZRI8 547 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 Q6ZSR6 202 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 CNGA4Q8IV77 575 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 TP53INP2Q8IXH6 220 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 CASKIN2Q8WXE0 1202 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 RAB7BQ96AH8 199 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 C1QTNF2Q9BXJ5 285 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 OSBPL1AQ9BXW6 950 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 TRIM5Q9C035 493 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 SLC39A8Q9C0K1 460 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 IP6K2Q9UHH9 426 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 MFHAS1Q9Y4C4 1052 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 PCDHGA1Q9Y5H4 931 aa16.17■□□□□ 0.18
LMX1B-204ENST00000561065 FAM208BQ5VWN6 2430 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 NBEAQ8NFP9 2946 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 MYO1FO00160 1098 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 EEF2KO00418 725 aaKnown RBP16.16■□□□□ 0.18
LMX1B-204ENST00000561065 TSPAN6O43657 245 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 SIGLEC6O43699 453 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 AKR1B10O60218 316 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 PRAMEF11O60813 436 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 PIAS2O75928 621 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 IL1R2P27930 398 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 PCK1P35558 622 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 FZD2Q14332 565 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 ZNF542PQ5EBM4 170 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 RFX8Q6ZV50 586 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 ZSWIM9Q86XI8 627 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 VSTM4Q8IW00 320 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 GALNT15Q8N3T1 639 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 CTNNBL1Q8WYA6 563 aaPredicted RBP16.16■□□□□ 0.18
LMX1B-204ENST00000561065 FEM1CQ96JP0 617 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 CCDC42Q96M95 316 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 UBA2Q9UBT2 640 aaPredicted RBP16.16■□□□□ 0.18
LMX1B-204ENST00000561065 KLF15Q9UIH9 416 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 HS3ST3A1Q9Y663 406 aa16.16■□□□□ 0.18
LMX1B-204ENST00000561065 SHROOM3Q8TF72 1996 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 LOC400499M0QZD8 3231 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 SSU72P8A0A1W2PR75 194 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 FFAR2O15552 330 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 H2AFZP0C0S5 128 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 TIMP2P16035 220 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 ERCC2P18074 760 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 IGFALSP35858 605 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 PAPOLAP51003 745 aaKnown RBP16.15■□□□□ 0.18
LMX1B-204ENST00000561065 NDST2P52849 883 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 PFN3P60673 137 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 RAD51Q06609 339 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 DPYSQ14117 519 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 HADHQ16836 314 aaKnown RBP16.15■□□□□ 0.18
LMX1B-204ENST00000561065 H2AFVQ71UI9 128 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 DNAJC7Q99615 494 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 ZWILCHQ9H900 591 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 DKK3Q9UBP4 350 aa16.15■□□□□ 0.18
LMX1B-204ENST00000561065 PNMA8BQ9ULN7 279 aaPredicted RBP16.15■□□□□ 0.18
LMX1B-204ENST00000561065 KNTC1P50748 2209 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 ADAMTS20P59510 1910 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 LY6G6EA0A0G2JKS1 128 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 TSPAN11A1L157 253 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 ARL4AP40617 200 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 HCAR3P49019 387 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 SLC18A3Q16572 532 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 SMTNL2Q2TAL5 461 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 PPP6R3Q5H9R7 873 aaPredicted RBP16.14■□□□□ 0.17
LMX1B-204ENST00000561065 HES3Q5TGS1 186 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 TXNRD3NBQ6F5E7 133 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 SARM1Q6SZW1 724 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 LZTR1Q8N653 840 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 DENND6BQ8NEG7 585 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 OR4C6Q8NH72 309 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 ASB12Q8WXK4 309 aa16.14■□□□□ 0.17
LMX1B-204ENST00000561065 NSMCE3Q96MG7 304 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms