RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 CCDC26Q8TAB7 109 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 ARRDC2Q8TBH0 407 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 NSMCE1Q8WV22 266 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 ERLEC1Q96DZ1 483 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 IMP4Q96G21 291 aaKnown RBP7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 OXNAD1Q96HP4 312 aaPredicted RBP7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 AGAP3Q96P47 875 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 NUDCD1Q96RS6 583 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 VAT1Q99536 393 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 ARHGAP9Q9BRR9 750 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 TUBB2BQ9BVA1 445 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 SLC6A17Q9H1V8 727 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 RSPH9Q9H1X1 276 aaPredicted RBP7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 GLOD4Q9HC38 313 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 PCDH9Q9HC56 1237 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 KLHL8Q9P2G9 620 aaPredicted RBP7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 PCYOX1Q9UHG3 505 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 EVLQ9UI08 416 aaPredicted RBP7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 ZNF148Q9UQR1 794 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 DRG1Q9Y295 367 aaKnown RBP7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 TTLL3Q9Y4R7 772 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 PCDHB9Q9Y5E1 797 aa7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 MYO18AQ92614 2054 aaKnown RBP7.12□□□□□ -1.27
CTDSPL2-210ENST00000560834 TCRBV21S2A2A0A5A6 115 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 TSPAN11A1L157 253 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 FAM86C2PA6NEL3 165 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 K7ESF4 209 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 RAD51CO43502 376 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 BNIP3LO60238 219 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 LZTS3O60299 673 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 OPHN1O60890 802 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 GCATO75600 419 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 PAPSS2O95340 614 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 METTL18O95568 372 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 MT-CYBP00156 380 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 IFNB1P01574 187 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 TDGF1P13385 188 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 GABRG2P18507 467 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 RPL22P35268 128 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 CLCN5P51795 746 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 AP1S1P61966 158 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 RPS14P62263 151 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 SKOR1P84550 965 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 NSUN2Q08J23 767 aaKnown RBP eCLIP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 TRAF2Q12933 501 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 PTK6Q13882 451 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 STARD3Q14849 445 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 SLC14A2Q15849 920 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 RALGPS1Q5JS13 557 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 FAXCQ5TGI0 409 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 NCEH1Q6PIU2 408 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 KDELC1Q6UW63 502 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 SRLQ86TD4 932 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 PRPF39Q86UA1 669 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 ZSWIM9Q86XI8 627 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 CACUL1Q86Y37 369 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 JAMLQ86YT9 394 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 SPEM1Q8N4L4 309 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 NOA1Q8NC60 698 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 MDGA1Q8NFP4 955 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 OR2T3Q8NH03 318 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 SPATA22Q8NHS9 363 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 GRIN3AQ8TCU5 1115 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 OR8D1Q8WZ84 308 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 FAM131CQ96AQ9 280 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 HHIPQ96QV1 700 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 FCRL5Q96RD9 977 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 RBM15Q96T37 977 aaKnown RBP eCLIP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 FAM129BQ96TA1 746 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 KRT12Q99456 494 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 SEMA3CQ99985 751 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 TRIM51Q9BSJ1 452 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 MLPHQ9BV36 600 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 CARD6Q9BX69 1037 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 TDRD1Q9BXT4 1180 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 MKRN2Q9H000 416 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 SLC25A51Q9H1U9 297 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 ZDHHC6Q9H6R6 413 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 FBRSQ9HAH7 460 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 NOD2Q9HC29 1040 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 CD93Q9NPY3 652 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 PRMT8Q9NR22 394 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 HECAQ9UBI9 543 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 SUN2Q9UH99 717 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 IL36AQ9UHA7 158 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 RSPH14Q9UHP6 348 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 TRHDEQ9UKU6 1024 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 SARDHQ9UL12 918 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 PPM1HQ9ULR3 514 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 SLC8A2Q9UPR5 921 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 PLXNA2O75051 1894 aa7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 TNRC6BQ9UPQ9 1833 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-210ENST00000560834 LRRK1Q38SD2 2015 aa7.1□□□□□ -1.27
CTDSPL2-210ENST00000560834 TRAFD1O14545 582 aaPredicted RBP7.1□□□□□ -1.27
CTDSPL2-210ENST00000560834 TTI1O43156 1089 aa7.1□□□□□ -1.27
CTDSPL2-210ENST00000560834 SPINT1O43278 529 aa7.1□□□□□ -1.27
CTDSPL2-210ENST00000560834 HTRA2O43464 458 aaPredicted RBP7.1□□□□□ -1.27
CTDSPL2-210ENST00000560834 FZD6O60353 706 aa7.1□□□□□ -1.27
CTDSPL2-210ENST00000560834 SYNCRIPO60506 623 aaKnown RBP7.1□□□□□ -1.27
CTDSPL2-210ENST00000560834 ATG13O75143 517 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms