RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 SPANXN3Q5MJ09 141 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 HP1BP3Q5SSJ5 553 aaPredicted RBP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 GRAMD4Q6IC98 578 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 NCEH1Q6PIU2 408 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 NLRP9Q7RTR0 991 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 TMEM135Q86UB9 458 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 TDRPQ86YL5 185 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 IGDCC3Q8IVU1 814 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 SUGP1Q8IWZ8 645 aaKnown RBP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 AGGF1Q8N302 714 aaeCLIP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 PPHLN1Q8NEY8 458 aaKnown RBP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 OR2AP1Q8NGE2 309 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 SPOCK2Q92563 424 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 PGM2Q96G03 612 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 LRCH3Q96II8 777 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 ZFYVE19Q96K21 471 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 TUBGCP5Q96RT8 1024 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 KXD1Q9BQD3 176 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 WDR83Q9BRX9 315 aaKnown RBP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 KIFC1Q9BW19 673 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 TDRD1Q9BXT4 1180 aaKnown RBP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 ADGRE3Q9BY15 652 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 CPEB1Q9BZB8 566 aaKnown RBP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 PLA2G2FQ9BZM2 168 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 STMN4Q9H169 189 aaPredicted RBP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 ACSS3Q9H6R3 686 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 ATP13A3Q9H7F0 1226 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 UBE2ZQ9H832 354 aaPredicted RBP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 TRPV5Q9NQA5 729 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 SYBUQ9NX95 663 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 RABGEF1Q9UJ41 708 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 SOX13Q9UN79 622 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 RPL26L1Q9UNX3 145 aaKnown RBP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 ERVW-1Q9UQF0 538 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 FCF1Q9Y324 198 aaKnown RBP8.7□□□□□ -1.02
TRAF3-209ENST00000560463 ACTL7AQ9Y615 435 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 MAD1L1Q9Y6D9 718 aa8.7□□□□□ -1.02
TRAF3-209ENST00000560463 EYSQ5T1H1 3165 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 TCRBV9S1A1TA0A576 114 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 HEATR9A2RTY3 570 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 ANKRD66B4E2M5 251 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 RASGRF2O14827 1237 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 MBTPS2O43462 519 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 SMAD6O43541 496 aaKnown RBP8.69□□□□□ -1.02
TRAF3-209ENST00000560463 ATP9BO43861 1147 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 ZNF821O75541 412 aaPredicted RBP8.69□□□□□ -1.02
TRAF3-209ENST00000560463 ALDH1A2O94788 518 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 PAPSS2O95340 614 aaPredicted RBP8.69□□□□□ -1.02
TRAF3-209ENST00000560463 POP4O95707 220 aaKnown RBP8.69□□□□□ -1.02
TRAF3-209ENST00000560463 SYF2O95926 243 aaKnown RBP8.69□□□□□ -1.02
TRAF3-209ENST00000560463 SHBGP04278 402 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 DLDP09622 509 aaKnown RBP8.69□□□□□ -1.02
TRAF3-209ENST00000560463 PRKCHP24723 683 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 SERPINA4P29622 427 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 GJA4P35212 333 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 CTSOP43234 321 aaPredicted RBP8.69□□□□□ -1.02
TRAF3-209ENST00000560463 RGRP47804 291 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 NUMBP49757 651 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 ST8SIA6P61647 398 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 PDE1BQ01064 536 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 BCL2L1Q07817 233 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 NAB1Q13506 487 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 OLIG2Q13516 323 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 GRM2Q14416 872 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 DLG2Q15700 870 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 GEN1Q17RS7 908 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 SIRPB2Q5JXA9 342 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 CERCAMQ5T4B2 595 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 AGBL2Q5U5Z8 902 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 TMEM215Q68D42 235 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 C22orf39Q6P5X5 142 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 UNC5AQ6ZN44 842 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 MPP5Q8N3R9 675 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 TERB1Q8NA31 727 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 OR2W6PQ8NHA6 318 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 CSGALNACT1Q8TDX6 532 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 FBF1Q8TES7 1133 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 UCMAQ8WVF2 138 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 CDKL2Q92772 493 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 PEX13Q92968 403 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 CFAP36Q96G28 342 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 EXOC2Q96KP1 924 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 RPL10LQ96L21 214 aaKnown RBP8.69□□□□□ -1.02
TRAF3-209ENST00000560463 FAM161BQ96MY7 647 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 TRIB3Q96RU7 358 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 SRPK1Q96SB4 655 aaKnown RBP8.69□□□□□ -1.02
TRAF3-209ENST00000560463 APOL2Q9BQE5 337 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 BRD9Q9H8M2 597 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 TMBIM4Q9HC24 238 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 ELOVL2Q9NXB9 296 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 MOCS1Q9NZB8 636 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 OGFRQ9NZT2 677 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 HACD3Q9P035 362 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 VPS18Q9P253 973 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 PRKAG3Q9UGI9 489 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 LGALS13Q9UHV8 139 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 RIMKLBQ9ULI2 386 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 PLA2G4CQ9UP65 541 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 TCAF1Q9Y4C2 921 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms