RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 GALNT15Q8N3T1 639 aa2.72□□□□□ -1.97
SPG11-222ENST00000560435 PJA1Q8NG27 643 aa2.72□□□□□ -1.97
SPG11-222ENST00000560435 RSC1A1Q92681 617 aa2.72□□□□□ -1.97
SPG11-222ENST00000560435 PRPF18Q99633 342 aaKnown RBP2.72□□□□□ -1.97
SPG11-222ENST00000560435 UBXN6Q9BZV1 441 aa2.72□□□□□ -1.97
SPG11-222ENST00000560435 NOX4Q9NPH5 578 aa2.72□□□□□ -1.97
SPG11-222ENST00000560435 SLC9A2Q9UBY0 812 aa2.72□□□□□ -1.97
SPG11-222ENST00000560435 DHDHQ9UQ10 334 aa2.72□□□□□ -1.97
SPG11-222ENST00000560435 EID1Q9Y6B2 187 aa2.72□□□□□ -1.97
SPG11-222ENST00000560435 RNF215Q9Y6U7 377 aa2.72□□□□□ -1.97
SPG11-222ENST00000560435 ASPDHA6ND91 283 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 WNT9BO14905 357 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 PIP5K1BO14986 540 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 SYN3O14994 580 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 HSPA12AO43301 675 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 TFRCP02786 760 aaKnown RBP2.71□□□□□ -1.98
SPG11-222ENST00000560435 LYL1P12980 280 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 NR1D1P20393 614 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 RPS6KA3P51812 740 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 IGBP1P78318 339 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 CAPSQ13938 189 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 LCTLQ6UWM7 567 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 DENND6AQ8IWF6 608 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 BRSK2Q8IWQ3 736 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 SRBD1Q8N5C6 995 aaKnown RBP2.71□□□□□ -1.98
SPG11-222ENST00000560435 SLC24A4Q8NFF2 622 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 ARRDC2Q8TBH0 407 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 CREB3L4Q8TEY5 395 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 ARRDC3Q96B67 414 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 ALG14Q96F25 216 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 PIGSQ96S52 555 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 ASCL2Q99929 193 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 ACAD9Q9H845 621 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 FNIP2Q9P278 1114 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 KLQ9UEF7 1012 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 KCNK7Q9Y2U2 307 aa2.71□□□□□ -1.98
SPG11-222ENST00000560435 C17orf100A8MU93 164 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 EFCAB8A8MWE9 144 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 HNRNPRO43390 633 aaKnown RBP2.7□□□□□ -1.98
SPG11-222ENST00000560435 NCK2O43639 380 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 STRNO43815 780 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 RFPL2O75678 378 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 WEE2P0C1S8 567 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 CDH1P12830 882 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 CTPS1P17812 591 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 GRIK2Q13002 908 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 AMZ1Q400G9 498 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 FAM209BQ5JX69 171 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 SHFQ7M4L6 423 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 ZC3HC1Q86WB0 502 aaKnown RBP2.7□□□□□ -1.98
SPG11-222ENST00000560435 GATAD2AQ86YP4 633 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 SFTPA2Q8IWL1 248 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 OR10V1Q8NGI7 309 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 ZNF524Q96C55 264 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 TIFAQ96CG3 184 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 TBCBQ99426 244 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 CXorf56Q9H5V9 222 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 TMEM160Q9NX00 188 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 OGFRQ9NZT2 677 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 KCNS2Q9ULS6 477 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 CEP83Q9Y592 693 aa2.7□□□□□ -1.98
SPG11-222ENST00000560435 ANKRD62A6NC57 917 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 OR6C68A6NDL8 312 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 PATE4P0C8F1 98 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 PAX1P15863 534 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 RXRAP19793 462 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 SP100P23497 879 aaPredicted RBP2.69□□□□□ -1.98
SPG11-222ENST00000560435 TNFSF4P23510 183 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 AVPR2P30518 371 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 HSPA7P48741 367 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 RELQ04864 619 aaPredicted RBP2.69□□□□□ -1.98
SPG11-222ENST00000560435 ZNF239Q16600 458 aaKnown RBP2.69□□□□□ -1.98
SPG11-222ENST00000560435 MPEG1Q2M385 716 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 PLEKHG6Q3KR16 790 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 IRAK1BP1Q5VVH5 260 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 CCNI2Q6ZMN8 369 aaPredicted RBP2.69□□□□□ -1.98
SPG11-222ENST00000560435 DPP9Q86TI2 863 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 ZMIZ2Q8NF64 920 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 TTC8Q8TAM2 541 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 OTUD7AQ8TE49 926 aaPredicted RBP2.69□□□□□ -1.98
SPG11-222ENST00000560435 RNF183Q96D59 192 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 ANKRD10Q9NXR5 420 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 SLC39A10Q9ULF5 831 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 RCE1Q9Y256 329 aa2.69□□□□□ -1.98
SPG11-222ENST00000560435 ASNA1O43681 348 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 CBX6O95503 412 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 HLA-DOBP13765 273 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 CENPAP49450 140 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 SLC35E4Q6ICL7 350 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 CEACAM20Q6UY09 585 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 MON1AQ86VX9 555 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 KLHDC9Q8NEP7 349 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 RASSF8Q8NHQ8 419 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 C18orf8Q96DM3 657 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 ZNF414Q96IQ9 312 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 FSD1Q9BTV5 496 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 STK33Q9BYT3 514 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 CLPBQ9H078 707 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 PAK5Q9P286 719 aa2.68□□□□□ -1.98
SPG11-222ENST00000560435 PSAT1Q9Y617 370 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms