RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 M0QYT0 321 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 PRAMEF10O60809 474 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 LTFP02788 710 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 PRNPP04156 253 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 RPLP0P05388 317 aaKnown RBP9.47□□□□□ -0.89
SMAD3-215ENST00000560424 SETSIPP0DME0 302 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 CD82P27701 267 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 EIF4A3P38919 411 aaKnown RBP9.47□□□□□ -0.89
SMAD3-215ENST00000560424 THOP1P52888 689 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 RAD23BP54727 409 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 DAOAP59103 153 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 TAS2R38P59533 333 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 RPS21P63220 83 aaKnown RBP9.47□□□□□ -0.89
SMAD3-215ENST00000560424 PTK2Q05397 1052 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 SGCGQ13326 291 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 C1orf61Q13536 156 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 FGL2Q14314 439 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 SPA17Q15506 151 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 PIP5KL1Q5T9C9 394 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 RAP1GAP2Q684P5 730 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 GJB7Q6PEY0 223 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 B3GNT8Q7Z7M8 397 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 ZFAND4Q86XD8 727 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 ARHGEF19Q8IW93 802 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 SLC35F3Q8IY50 421 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 PPM1KQ8N3J5 372 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 SDR16C5Q8N3Y7 309 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 UBA3Q8TBC4 463 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 HTR3CQ8WXA8 447 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 TMEM159Q96B96 161 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 KREMEN1Q96MU8 473 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 CMKLR1Q99788 373 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 BOCQ9BWV1 1114 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 CPEB1Q9BZB8 566 aaKnown RBP9.47□□□□□ -0.89
SMAD3-215ENST00000560424 SLC13A1Q9BZW2 595 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 LUC7LQ9NQ29 371 aaKnown RBP9.47□□□□□ -0.89
SMAD3-215ENST00000560424 SLC12A6Q9UHW9 1150 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 INTUQ9ULD6 942 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 PLAAQ9Y263 795 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 TLR6Q9Y2C9 796 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 REXO2Q9Y3B8 237 aaKnown RBP9.47□□□□□ -0.89
SMAD3-215ENST00000560424 RP1P56715 2156 aa9.47□□□□□ -0.89
SMAD3-215ENST00000560424 ZFC3H1O60293 1989 aaKnown RBP9.46□□□□□ -0.89
SMAD3-215ENST00000560424 POM121BA6NF01 834 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 USP27XA6NNY8 438 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 BTNL10A8MVZ5 291 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 FOXN3O00409 490 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 PIK3R2O00459 728 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 NTN3O00634 580 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 PJA2O43164 708 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 ATP9BO43861 1147 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 AKR1B10O60218 316 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 PAK4O96013 591 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 PLEKP08567 350 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 ITIH1P19827 911 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 TACR2P21452 398 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 CCKBRP32239 447 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 CHRNA3P32297 505 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 RECQLP46063 649 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 VAV2P52735 878 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 BPIFB4P59827 614 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 CUL2Q13617 745 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 PTK2BQ14289 1009 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 TDRD12Q587J7 1177 aaKnown RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 RABGAP1LQ5R372 815 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 FAXCQ5TGI0 409 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 TTC39BQ5VTQ0 682 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 SEL1L3Q68CR1 1132 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 KIAA1161Q6NSJ0 714 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 ERN2Q76MJ5 926 aaKnown RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 ZNF571Q7Z3V5 609 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 ZNF677Q86XU0 584 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 SCML4Q8N228 414 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 IL22RA1Q8N6P7 574 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 UBR7Q8N806 425 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 ARL10Q8N8L6 244 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 SLC30A5Q8TAD4 765 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 C9orf43Q8TAL5 461 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 EPS8L1Q8TE68 723 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 JPH3Q8WXH2 748 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 KCTD13Q8WZ19 329 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 IRGQQ8WZA9 623 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 USP7Q93009 1102 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 CCDC74AQ96AQ1 378 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 FAM149B1Q96BN6 582 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 MYEOVQ96EZ4 313 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 FEM1CQ96JP0 617 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 FCRL2Q96LA5 508 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 BMFQ96LC9 184 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 CATSPER2Q96P56 530 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 SLC17A9Q9BYT1 436 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 TSGA10Q9BZW7 698 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 DEF6Q9H4E7 631 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 ZNF71Q9NQZ8 489 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 SIRPGQ9P1W8 387 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 VPS28Q9UK41 221 aa9.46□□□□□ -0.9
SMAD3-215ENST00000560424 ZFR2Q9UPR6 939 aaKnown RBP9.46□□□□□ -0.9
SMAD3-215ENST00000560424 USP9YO00507 2555 aaPredicted RBP9.45□□□□□ -0.9
SMAD3-215ENST00000560424 TCAF2A6NFQ2 919 aa9.45□□□□□ -0.9
SMAD3-215ENST00000560424 LMO7DNF2Z398 122 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms