RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 EPOP01588 193 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 FGGP02679 453 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 UGT2B4P06133 528 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 ITGAVP06756 1048 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 CTSLP07711 333 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 ADRB3P13945 408 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 PXNP49023 591 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 NUMBP49757 651 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 ETF1P62495 437 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 RPL6Q02878 288 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 ADCY2Q08462 1091 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 PRPSAP1Q14558 356 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 LONRF2Q1L5Z9 754 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 P3H1Q32P28 736 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 ATXN7L2Q5T6C5 722 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 PAPD7Q5XG87 772 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 PMS2CLQ68D20 193 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 KIAA1161Q6NSJ0 714 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 NPNTQ6UXI9 565 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 LEKR1Q6ZMV7 388 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 TTC7BQ86TV6 843 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 ABCA7Q8IZY2 2146 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 GPR161Q8N6U8 529 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 GRIN3AQ8TCU5 1115 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 ASB12Q8WXK4 309 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 ECHDC3Q96DC8 303 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 TOE1Q96GM8 510 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 FEM1CQ96JP0 617 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 KLHL32Q96NJ5 620 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 OSBPL9Q96SU4 736 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 SEMA3CQ99985 751 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 POLR3BQ9NW08 1133 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 KLHL8Q9P2G9 620 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 SAE1Q9UBE0 346 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 PHTF1Q9UMS5 762 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 DMTF1Q9Y222 760 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 AAR2Q9Y312 384 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 SAR1BQ9Y6B6 198 aa12.18□□□□□ -0.46
RABGGTA-215ENST00000560207 A0A1W2PP55 124 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 C5orf60A6NFR6 353 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 USP27XA6NNY8 438 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 PRR5-ARHGAP8B1AHC4 643 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 RNF103O00237 685 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 ENC1O14682 589 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 PSMD3O43242 534 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 MAP3K6O95382 1288 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 LMNAP02545 664 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 GNSP15586 552 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 PTPN3P26045 913 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 DRD3P35462 400 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 PAFAH1B1P43034 410 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 RPS21P63220 83 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 DMWDQ09019 674 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 CNTN1Q12860 1018 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 UGP2Q16851 508 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 PLK5Q496M5 336 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 ARMC12Q5T9G4 340 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 AGBL4Q5VU57 503 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 PID1Q7Z2X4 250 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 PRPF39Q86UA1 669 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 TRIM69Q86WT6 500 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 AADATQ8N5Z0 425 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 OR14C36Q8NHC7 312 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 CEP76Q8TAP6 659 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 SKA1Q96BD8 255 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 IMP4Q96G21 291 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 EXOC2Q96KP1 924 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 RUNDC3BQ96NL0 473 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 FCRL5Q96RD9 977 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 C1QTNF7Q9BXJ2 289 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 NEUROG2Q9H2A3 272 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 NOD2Q9HC29 1040 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 GLOD4Q9HC38 313 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 SEPT10Q9P0V9 454 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 GMEB2Q9UKD1 530 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 SARDHQ9UL12 918 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 ACTL7AQ9Y615 435 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 PI4KAP42356 2102 aa12.17□□□□□ -0.46
RABGGTA-215ENST00000560207 TBC1D3DA0A087WVF3 549 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TBC1D3IA0A087WXS9 549 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TBC1D3EA0A087X179 549 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TBC1D3KA0A087X1G2 549 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TBC1D3FA6NER0 549 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 ERI2A8K979 691 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 METTL12A8MUP2 240 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 UPK3BL1B0FP48 263 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TBC1D3LB9A6J9 549 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 UPK3BL2E5RIL1 263 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 NEMP1O14524 444 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 KCNN4O15554 427 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 LIASO43766 372 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 GCATO75600 419 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 ATP1A1P05023 1023 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 HLA-DQB2P05538 268 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 RETP07949 1114 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TBC1D3HP0C7X1 549 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 CYP2A6P11509 494 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 RBL1P28749 1068 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 CASQ1P31415 396 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms