RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 DHDHQ9UQ10 334 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 RAI2Q9Y5P3 530 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 CKAP5Q14008 2032 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 NOTCH4Q99466 2003 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 STRNO43815 780 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 ZBED4O75132 1171 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 SOX30O94993 753 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 DDAH2O95865 285 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 ADD2P35612 726 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 PNLIPRP1P54315 467 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 NR1H2P55055 460 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 POU3F1Q03052 451 aaPredicted RBP3.94□□□□□ -1.78
SPG11-218ENST00000559754 SYTL3Q4VX76 610 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 RUNDC3AQ59EK9 446 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 EFHC1Q5JVL4 640 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 SPECC1Q5M775 1068 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 C1QTNF12Q5T7M4 302 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 SULT6B1Q6IMI4 303 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 LIN54Q6MZP7 749 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 SPSB3Q6PJ21 355 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 FJX1Q86VR8 437 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 C2CD5Q86YS7 1000 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 ZMIZ2Q8NF64 920 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 LMO3Q8TAP4 145 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 C2CD4CQ8TF44 421 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 THAP4Q8WY91 577 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 C7orf26Q96N11 449 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 DDX23Q9BUQ8 820 aaKnown RBP3.94□□□□□ -1.78
SPG11-218ENST00000559754 CLPBQ9H078 707 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 PREBQ9HCU5 417 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 ANKEF1Q9NU02 776 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 AASSQ9UDR5 926 aa3.94□□□□□ -1.78
SPG11-218ENST00000559754 PLEKHB1Q9UF11 243 aaPredicted RBP3.94□□□□□ -1.78
SPG11-218ENST00000559754 FAM170AA1A519 330 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 FSD2A1L4K1 749 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 IFITM10A6NMD0 228 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 ANP32CO43423 234 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 ITM2AO43736 263 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 KCNJ13O60928 360 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 COMPP49747 757 aaPredicted RBP3.93□□□□□ -1.78
SPG11-218ENST00000559754 UBE3AQ05086 875 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 KIF5AQ12840 1032 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 HNF4GQ14541 408 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 ZNF284Q2VY69 593 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 H1FNTQ75WM6 255 aaPredicted RBP3.93□□□□□ -1.78
SPG11-218ENST00000559754 RRAGAQ7L523 313 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 PATL1Q86TB9 770 aaKnown RBP3.93□□□□□ -1.78
SPG11-218ENST00000559754 NR2C2APQ86WQ0 139 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 BRSK2Q8IWQ3 736 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 SCAIQ8N9R8 606 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 TEX45Q8NA69 505 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 OR6Y1Q8NGX8 325 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 UCMAQ8WVF2 138 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 DUX5Q96PT3 197 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 ALDH8A1Q9H2A2 487 aaPredicted RBP3.93□□□□□ -1.78
SPG11-218ENST00000559754 ACAD9Q9H845 621 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 THAP1Q9NVV9 213 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 TMEM160Q9NX00 188 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 UPB1Q9UBR1 384 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 FBXO40Q9UH90 709 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 KCND3Q9UK17 655 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 FEM1BQ9UK73 627 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 ICAM5Q9UMF0 924 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 GPR34Q9UPC5 381 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 RCE1Q9Y256 329 aa3.93□□□□□ -1.78
SPG11-218ENST00000559754 A0A096LPK6 155 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 FAM90A20PA6NIJ5 464 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 H0Y3Z8 333 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 USO1O60763 962 aaKnown RBP3.92□□□□□ -1.78
SPG11-218ENST00000559754 SERPINI2O75830 405 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 TMEM63AO94886 807 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 METTL18O95568 372 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 CYP21A2P08686 494 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 LYL1P12980 280 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 TNNT1P13805 278 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 YWHAQP27348 245 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 PNPLA4P41247 253 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 DPP6P42658 865 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 GPR12P47775 334 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
SPG11-218ENST00000559754 CHRNDQ07001 517 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 PDCLQ13371 301 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 THOC5Q13769 683 aaKnown RBP3.92□□□□□ -1.78
SPG11-218ENST00000559754 SMAD1Q15797 465 aaKnown RBP3.92□□□□□ -1.78
SPG11-218ENST00000559754 MEA1Q16626 185 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 KIF19Q2TAC6 998 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 ZNF628Q5EBL2 1059 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 ARMC3Q5W041 872 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 ATG9BQ674R7 924 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 PRSS57Q6UWY2 283 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 SYNE3Q6ZMZ3 975 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 RASGRP2Q7LDG7 609 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 C16orf82Q7Z2V1 217 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 CUZD1Q86UP6 607 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 TCP11L2Q8N4U5 519 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 MIGA1Q8NAN2 632 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 DNASE2BQ8WZ79 361 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 NCSTNQ92542 709 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 HVCN1Q96D96 273 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 RRP36Q96EU6 259 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms