RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 PLLPQ9Y342 182 aa12.81□□□□□ -0.36
USP3-213ENST00000559711 CCDC195A0A1B0GUA6 201 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 VAPBO95292 243 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 CYBBP04839 570 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 SCNN1BP51168 640 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 PLK1P53350 603 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 NTHL1P78549 312 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 LAMB3Q13751 1172 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 SEPT6Q14141 434 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 SEPT7Q16181 437 aaKnown RBP12.8□□□□□ -0.36
USP3-213ENST00000559711 GLIPR1L2Q4G1C9 344 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 RALGPS1Q5JS13 557 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 ELMSAN1Q6PJG2 1045 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 LINGO4Q6UY18 593 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 CDHR3Q6ZTQ4 885 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 TPGS1Q6ZTW0 290 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 GRASPQ7Z6J2 395 aaPredicted RBP12.8□□□□□ -0.36
USP3-213ENST00000559711 PIGWQ7Z7B1 504 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 NDUFAF2Q8N183 169 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 TTC16Q8NEE8 873 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 RIN3Q8TB24 985 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 PEX13Q92968 403 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 BHMTQ93088 406 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 LMLNQ96KR4 655 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 LHX3Q9UBR4 397 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 RIMKLBQ9ULI2 386 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 CLEC4EQ9ULY5 219 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 CCDC78A2IDD5 438 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 TIMM44O43615 452 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 LDB2O43679 373 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 PRLP01236 227 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 HADHAP40939 763 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 PDE1BQ01064 536 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 ACVR1Q04771 509 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 LMAN2Q12907 356 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 SLC12A1Q13621 1099 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 SMAD1Q15797 465 aaKnown RBP12.8□□□□□ -0.36
USP3-213ENST00000559711 ZNF77Q15935 545 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 FSTL4Q6MZW2 842 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 RETSATQ6NUM9 610 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 ADGRD2Q7Z7M1 963 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 APCDD1Q8J025 514 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 DCLK2Q8N568 766 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 OR13J1Q8NGT2 312 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 BRSK1Q8TDC3 778 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 ATP2A3Q93084 1043 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 FAM111AQ96PZ2 611 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 SLC13A1Q9BZW2 595 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 NSRP1Q9H0G5 558 aaKnown RBP12.8□□□□□ -0.36
USP3-213ENST00000559711 LMAN2LQ9H0V9 348 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 C12orf65Q9H3J6 166 aaKnown RBP12.8□□□□□ -0.36
USP3-213ENST00000559711 PLK2Q9NYY3 685 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 GGA2Q9UJY4 613 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 OBSL1O75147 1896 aa12.8□□□□□ -0.36
USP3-213ENST00000559711 GOLGA8TH3BQL2 631 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 TPP1O14773 563 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 PRAMEF12O95522 483 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 MT-CO1P00395 513 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 PENKP01210 267 aaPredicted RBP12.79□□□□□ -0.36
USP3-213ENST00000559711 AHSGP02765 367 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 GABRB3P28472 473 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 PBX2P40425 430 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 SLC20A2Q08357 652 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 USP4Q13107 963 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 THOC5Q13769 683 aaKnown RBP12.79□□□□□ -0.36
USP3-213ENST00000559711 PDE1CQ14123 709 aaPredicted RBP12.79□□□□□ -0.36
USP3-213ENST00000559711 UGP2Q16851 508 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 INSCQ1MX18 579 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 PLEKHG6Q3KR16 790 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 ZNF697Q5TEC3 545 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 GKAP1Q5VSY0 366 aaPredicted RBP12.79□□□□□ -0.36
USP3-213ENST00000559711 NEPROQ6NW34 567 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 NCEH1Q6PIU2 408 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 KIAA0408Q6ZU52 694 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 RBM23Q86U06 439 aaKnown RBP12.79□□□□□ -0.36
USP3-213ENST00000559711 ZC3HC1Q86WB0 502 aaKnown RBP12.79□□□□□ -0.36
USP3-213ENST00000559711 C2CD4AQ8NCU7 369 aaPredicted RBP12.79□□□□□ -0.36
USP3-213ENST00000559711 SEC16BQ96JE7 1060 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 EXOC2Q96KP1 924 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 ZSWIM3Q96MP5 696 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 FAM167BQ9BTA0 163 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 TDRD1Q9BXT4 1180 aaKnown RBP12.79□□□□□ -0.36
USP3-213ENST00000559711 IQCGQ9H095 443 aaKnown RBP12.79□□□□□ -0.36
USP3-213ENST00000559711 RHOJQ9H4E5 214 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 TLE6Q9H808 572 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 ABCB8Q9NUT2 735 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 PCMTD2Q9NV79 361 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 TBC1D14Q9P2M4 693 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 MTO1Q9Y2Z2 717 aaKnown RBP12.79□□□□□ -0.36
USP3-213ENST00000559711 RAI2Q9Y5P3 530 aa12.79□□□□□ -0.36
USP3-213ENST00000559711 EBAG9O00559 213 aa12.78□□□□□ -0.36
USP3-213ENST00000559711 SLC7A4O43246 635 aa12.78□□□□□ -0.36
USP3-213ENST00000559711 CEBPBP17676 345 aa12.78□□□□□ -0.36
USP3-213ENST00000559711 TYK2P29597 1187 aa12.78□□□□□ -0.36
USP3-213ENST00000559711 WEE1P30291 646 aa12.78□□□□□ -0.36
USP3-213ENST00000559711 CD70P32970 193 aa12.78□□□□□ -0.36
USP3-213ENST00000559711 POLD2P49005 469 aa12.78□□□□□ -0.36
USP3-213ENST00000559711 SERPINB8P50452 374 aa12.78□□□□□ -0.36
USP3-213ENST00000559711 CSRP3P50461 194 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms