RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 NCKAP1Q9Y2A7 1128 aa21.91■■□□□ 1.1
SNX1-206ENST00000559389 TRAFD1O14545 582 aaPredicted RBP21.9■■□□□ 1.1
SNX1-206ENST00000559389 STK10O94804 968 aaKnown RBP21.9■■□□□ 1.1
SNX1-206ENST00000559389 MMP2P08253 660 aa21.9■■□□□ 1.1
SNX1-206ENST00000559389 CASQ1P31415 396 aa21.9■■□□□ 1.1
SNX1-206ENST00000559389 CD68P34810 354 aaPredicted RBP21.9■■□□□ 1.1
SNX1-206ENST00000559389 TRAF2Q12933 501 aa21.9■■□□□ 1.1
SNX1-206ENST00000559389 IHHQ14623 411 aa21.9■■□□□ 1.1
SNX1-206ENST00000559389 ERN2Q76MJ5 926 aaKnown RBP21.9■■□□□ 1.1
SNX1-206ENST00000559389 FAM124AQ86V42 546 aa21.9■■□□□ 1.1
SNX1-206ENST00000559389 C11orf74Q86VG3 221 aa21.9■■□□□ 1.1
SNX1-206ENST00000559389 IMP4Q96G21 291 aaKnown RBP21.9■■□□□ 1.1
SNX1-206ENST00000559389 SPATA13Q96N96 652 aa21.9■■□□□ 1.1
SNX1-206ENST00000559389 SLC25A51Q9H1U9 297 aa21.9■■□□□ 1.1
SNX1-206ENST00000559389 NEUROG2Q9H2A3 272 aa21.9■■□□□ 1.1
SNX1-206ENST00000559389 SUV39H2Q9H5I1 410 aa21.9■■□□□ 1.1
SNX1-206ENST00000559389 WSB2Q9NYS7 404 aaPredicted RBP21.9■■□□□ 1.1
SNX1-206ENST00000559389 R4GN57 208 aa21.9■■□□□ 1.1
SNX1-206ENST00000559389 HTRA2O43464 458 aaPredicted RBP21.89■■□□□ 1.09
SNX1-206ENST00000559389 ITGAVP06756 1048 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 ADRB3P13945 408 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 NFKB1P19838 968 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 ACSL1P33121 698 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 ADPRHP54922 357 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 GDF10P55107 478 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 SKOR1P84550 965 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 SNX1Q13596 522 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 SLC14A2Q15849 920 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 BRAT1Q6PJG6 821 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 SLC36A4Q6YBV0 504 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 ZSWIM9Q86XI8 627 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.89■■□□□ 1.09
SNX1-206ENST00000559389 FAM71DQ8N9W8 422 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 HCAR2Q8TDS4 363 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 SPOCK2Q92563 424 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 TADA1Q96BN2 335 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 RTP4Q96DX8 246 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 TOE1Q96GM8 510 aaKnown RBP21.89■■□□□ 1.09
SNX1-206ENST00000559389 BTBD1Q9H0C5 482 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 GBA3Q9H227 469 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 SGK2Q9HBY8 427 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 HOMER3Q9NSC5 361 aa21.89■■□□□ 1.09
SNX1-206ENST00000559389 C5orf60A6NFR6 353 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 C16orf96A6NNT2 1141 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 PLRG1O43660 514 aaKnown RBP21.88■■□□□ 1.09
SNX1-206ENST00000559389 OPHN1O60890 802 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 SERPINF2P08697 491 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 CD86P42081 329 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 ABL2P42684 1182 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 TAS2R38P59533 333 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 CYP1B1Q16678 543 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 ANKRD20A2Q5SQ80 823 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 CFAP58Q5T655 872 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 ANKRD20A1Q5TYW2 823 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 ANKRD20A3Q5VUR7 823 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 ITPRIPL1Q6GPH6 555 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.88■■□□□ 1.09
SNX1-206ENST00000559389 PID1Q7Z2X4 250 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 PRPF39Q86UA1 669 aaKnown RBP21.88■■□□□ 1.09
SNX1-206ENST00000559389 ZSCAN30Q86W11 494 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 CREG2Q8IUH2 290 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 C12orf50Q8NA57 414 aaPredicted RBP21.88■■□□□ 1.09
SNX1-206ENST00000559389 CCDC110Q8TBZ0 833 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 TDRD1Q9BXT4 1180 aaKnown RBP21.88■■□□□ 1.09
SNX1-206ENST00000559389 RSPH14Q9UHP6 348 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 PCDHGC4Q9Y5F7 938 aa21.88■■□□□ 1.09
SNX1-206ENST00000559389 CCDC15Q0P6D6 951 aa21.87■■□□□ 1.09
SNX1-206ENST00000559389 FBXL19Q6PCT2 694 aa21.87■■□□□ 1.09
SNX1-206ENST00000559389 CAPZA3Q96KX2 299 aa21.87■■□□□ 1.09
SNX1-206ENST00000559389 FCRL5Q96RD9 977 aa21.87■■□□□ 1.09
SNX1-206ENST00000559389 AP1M1Q9BXS5 423 aa21.87■■□□□ 1.09
SNX1-206ENST00000559389 EPC1Q9H2F5 836 aa21.87■■□□□ 1.09
SNX1-206ENST00000559389 ZNF148Q9UQR1 794 aa21.87■■□□□ 1.09
SNX1-206ENST00000559389 RAI2Q9Y5P3 530 aa21.87■■□□□ 1.09
SNX1-206ENST00000559389 GOLGA6L10A0A0M3HER8 536 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 A0A1W2PQ67 120 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 UPK3BL1B0FP48 263 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 C10orf142B7Z368 130 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 UPK3BL2E5RIL1 263 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 SPINT1O43278 529 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 FZD6O60353 706 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 PGLSO95336 258 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 SEMA4FO95754 770 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 CPP00450 1065 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 CA4P22748 312 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 STIP1P31948 543 aaKnown RBP21.86■■□□□ 1.09
SNX1-206ENST00000559389 RPL6Q02878 288 aaKnown RBP21.86■■□□□ 1.09
SNX1-206ENST00000559389 P3H1Q32P28 736 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 PMS2CLQ68D20 193 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 CEP68Q76N32 757 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 RAB7BQ96AH8 199 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 RBM15Q96T37 977 aaKnown RBP eCLIP21.86■■□□□ 1.09
SNX1-206ENST00000559389 GORASP1Q9BQQ3 440 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 PCED1AQ9H1Q7 454 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 KDM4CQ9H3R0 1056 aa21.86■■□□□ 1.09
SNX1-206ENST00000559389 KIF2AO00139 706 aaPredicted RBP21.85■■□□□ 1.09
SNX1-206ENST00000559389 AREL1O15033 823 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 AP1G1O43747 822 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 PHF2O75151 1096 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 NDUFS2O75306 463 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms