RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 TM7SF2O76062 418 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 MTA2O94776 668 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 NDUFA10O95299 355 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 TRIM16O95361 564 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 PAK4O96013 591 aaPredicted RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 ITGAVP06756 1048 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 ADRB1P08588 477 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 TNNT1P13805 278 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 TCF4P15884 667 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 PRLRP16471 622 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 CA4P22748 312 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 AMPD1P23109 780 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 CES1P23141 567 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 GKP32189 559 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 CETN2P41208 172 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 GARSP41250 739 aaKnown RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 CTSKP43235 329 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 GRK6P43250 576 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 MAGEA1P43355 309 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 TNNT3P45378 269 aaPredicted RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 MMP13P45452 471 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 RABIFP47224 123 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 CSNK1DP48730 415 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 TAS2R38P59533 333 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 AP1S1P61966 158 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 PPP2CBP62714 309 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 PPP2CAP67775 309 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 FAM193AP78312 1265 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 SIM1P81133 766 aaPredicted RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 ITKQ08881 620 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 MMRN1Q13201 1228 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 CKAP5Q14008 2032 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 DPYSL3Q14195 570 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 PTK2BQ14289 1009 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 CYTH1Q15438 398 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 TRIP6Q15654 476 aaKnown RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 IFI16Q16666 785 aaKnown RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 UGP2Q16851 508 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 ZNF423Q2M1K9 1284 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 ZNF284Q2VY69 593 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 ANKRD20A8PQ5CZ79 823 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 RALGPS1Q5JS13 557 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 AFMIDQ63HM1 303 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 SEL1L3Q68CR1 1132 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 TXNRD3NBQ6F5E7 133 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 LAYNQ6UX15 382 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 PARS2Q7L3T8 475 aaKnown RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 DAAM2Q86T65 1068 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 SRLQ86TD4 932 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 NAXDQ8IW45 347 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 RHOT1Q8IXI2 618 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 CCNYQ8ND76 341 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 DEFB124Q8NES8 71 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 OR2I1PQ8NGU4 316 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 RHBDD1Q8TEB9 315 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 PDCD6IPQ8WUM4 868 aaKnown RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 ARRDC3Q96B67 414 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 LENG8Q96PV6 779 aaPredicted RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 PSKH2Q96QS6 385 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 BAG1Q99933 345 aaPredicted RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 FERMT1Q9BQL6 677 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 POLR1EQ9GZS1 481 aaKnown RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 KLC2Q9H0B6 622 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 SUV39H2Q9H5I1 410 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 ERVMER34-1Q9H9K5 563 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 EBF2Q9HAK2 575 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 PDFQ9HBH1 243 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 DDX56Q9NY93 547 aaKnown RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 NENFQ9UMX5 172 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 FNDC3AQ9Y2H6 1198 aaKnown RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 PCDHA13Q9Y5I0 950 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 HS3ST3A1Q9Y663 406 aa4.42□□□□□ -1.7
SNX1-205ENST00000559339 EPN1Q9Y6I3 576 aaPredicted RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 CNOT1A5YKK6 2376 aaKnown RBP4.42□□□□□ -1.7
SNX1-205ENST00000559339 SPTBN2O15020 2390 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 LAMA1P25391 3075 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 A0A1B0GTQ1 180 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 IGLON5A6NGN9 336 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 SOWAHDA6NJG2 315 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ZNF487B1APH4 448 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 H0Y8X5 98 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 H3BM21 787 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 KCNK3O14649 394 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 PPP1R12AO14974 1030 aaPredicted RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 AREL1O15033 823 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 MATN3O15232 486 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 INSIG1O15503 277 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 TNFSF14O43557 240 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 PSTPIP1O43586 416 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 SH3BP5O60239 455 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 LZTS3O60299 673 aaPredicted RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 GJB3O75712 270 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ZRANB2O95218 330 aaKnown RBP eCLIP4.41□□□□□ -1.7
SNX1-205ENST00000559339 PIGNO95427 931 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 LCA5LO95447 670 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 KRT1P04264 644 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 PTMAP06454 111 aaKnown RBP4.41□□□□□ -1.7
SNX1-205ENST00000559339 CD48P09326 243 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 ELFN1P0C7U0 828 aa4.41□□□□□ -1.7
SNX1-205ENST00000559339 THEGLP0DJG4 465 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms