RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 KCNK1O00180 336 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 KHNYNO15037 678 aaKnown RBP18.91■□□□□ 0.62
CASC4-209ENST00000559222 LATO43561 262 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 ZRANB2O95218 330 aaKnown RBP eCLIP18.91■□□□□ 0.629e-9■■■□□ 15.7
CASC4-209ENST00000559222 WNT1P04628 370 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 HLA-DQB2P05538 268 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 PRLRP16471 622 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 ENGP17813 658 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 CD27P26842 260 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 CSNK1DP48730 415 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 ZNF211Q13398 564 aaPredicted RBP18.91■□□□□ 0.62
CASC4-209ENST00000559222 FGL2Q14314 439 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 DUOXA1Q1HG43 343 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 ODF2Q5BJF6 829 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 TFDP3Q5H9I0 405 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 FBXL19Q6PCT2 694 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 KDM7AQ6ZMT4 941 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 CCNYQ8ND76 341 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 LRIG1Q96JA1 1093 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 EDEM2Q9BV94 578 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 OSBPL1AQ9BXW6 950 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 MAK16Q9BXY0 300 aaKnown RBP18.91■□□□□ 0.62
CASC4-209ENST00000559222 NOD2Q9HC29 1040 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 PREBQ9HCU5 417 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 FZD3Q9NPG1 666 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 A0A1B0GTW7 788 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 A0A1B0GVT2 93 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 TSPAN11A1L157 253 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 MATN3O15232 486 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 BCAT2O15382 392 aaPredicted RBP18.9■□□□□ 0.62
CASC4-209ENST00000559222 SERPINF2P08697 491 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 PYGMP11217 842 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 CCNCP24863 283 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 HOXD12P35452 270 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 CSNK1EP49674 416 aaKnown RBP18.9■□□□□ 0.62
CASC4-209ENST00000559222 DSC2Q02487 901 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 PPIDQ08752 370 aaKnown RBP18.9■□□□□ 0.62
CASC4-209ENST00000559222 TRAF2Q12933 501 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 ZNF284Q2VY69 593 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 MARC1Q5VT66 337 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 TRIM69Q86WT6 500 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 CCDC13Q8IYE1 715 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 RCOR2Q8IZ40 523 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 RBM41Q96IZ5 413 aaKnown RBP18.9■□□□□ 0.62
CASC4-209ENST00000559222 KDM4CQ9H3R0 1056 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 SUV39H2Q9H5I1 410 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 LZTFL1Q9NQ48 299 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 AMFRQ9UKV5 643 aa18.9■□□□□ 0.62
CASC4-209ENST00000559222 CACNA1EQ15878 2313 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 TRAFD1O14545 582 aaPredicted RBP18.89■□□□□ 0.61
CASC4-209ENST00000559222 CDX4O14627 284 aaPredicted RBP18.89■□□□□ 0.61
CASC4-209ENST00000559222 AREL1O15033 823 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 PCDH8O95206 1070 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 MAPK8P45983 427 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 LMNB2Q03252 620 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 RAD51Q06609 339 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 NSUN2Q08J23 767 aaKnown RBP eCLIP18.89■□□□□ 0.61
CASC4-209ENST00000559222 NIPAL4Q0D2K0 466 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 GRIK2Q13002 908 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 PTPRRQ15256 657 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 PPP2R5EQ16537 467 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 TMEM259Q4ZIN3 620 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 PEX26Q7Z412 305 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 HORMAD1Q86X24 394 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 LRRC49Q8IUZ0 686 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 GPR161Q8N6U8 529 aaKnown RBP18.89■□□□□ 0.61
CASC4-209ENST00000559222 CNTD1Q8N815 330 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 RMDN1Q96DB5 314 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 CALR3Q96L12 384 aaKnown RBP18.89■□□□□ 0.61
CASC4-209ENST00000559222 SMIM14Q96QK8 99 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 NUDCD1Q96RS6 583 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 TUBGCP5Q96RT8 1024 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 FAM118BQ9BPY3 351 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 CAAP1Q9H8G2 361 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 C10orf88Q9H8K7 445 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 SCUBE2Q9NQ36 999 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 RBM22Q9NW64 420 aaKnown RBP eCLIP18.89■□□□□ 0.61
CASC4-209ENST00000559222 DKK3Q9UBP4 350 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 SLC6A14Q9UN76 642 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 PCDHGC4Q9Y5F7 938 aa18.89■□□□□ 0.61
CASC4-209ENST00000559222 CCDC66A2RUB6 948 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 SLC31A1O15431 190 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 JCHAINP01591 159 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 CCDC175P0C221 793 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 CCNB1P14635 433 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 MX2P20592 715 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 RENBPP51606 427 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 AP1S1P61966 158 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 AP1B1Q10567 949 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 HNRNPDQ14103 355 aaKnown RBP18.88■□□□□ 0.61
CASC4-209ENST00000559222 RSPO4Q2I0M5 234 aaPredicted RBP18.88■□□□□ 0.61
CASC4-209ENST00000559222 TIGD7Q6NT04 549 aaPredicted RBP18.88■□□□□ 0.61
CASC4-209ENST00000559222 TTC7BQ86TV6 843 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 NSMCE1Q8WV22 266 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 ECHDC3Q96DC8 303 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 SERAC1Q96JX3 654 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 PDLIM2Q96JY6 352 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 SEMA3CQ99985 751 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 GTPBP2Q9BX10 602 aaKnown RBP18.88■□□□□ 0.61
CASC4-209ENST00000559222 NUSAP1Q9BXS6 441 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms