RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 HLA-BQ31612 363 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 FAM46CQ5VWP2 391 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 KCTD16Q68DU8 428 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 TMCO3Q6UWJ1 677 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 GDPD4Q6W3E5 623 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 GCNT7Q6ZNI0 430 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 SRLQ86TD4 932 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 TMTC1Q8IUR5 882 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 ARRDC2Q8TBH0 407 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 CASKIN2Q8WXE0 1202 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 OLFM3Q96PB7 478 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 CALN1Q9BXU9 219 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 KDM4CQ9H3R0 1056 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 WASF3Q9UPY6 502 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 BTBD3Q9Y2F9 522 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 ANKRD6Q9Y2G4 727 aa12.79□□□□□ -0.36
RABGGTA-207ENST00000558936 PLXNB3Q9ULL4 1909 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 NCOR2Q9Y618 2525 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 POM121BA6NF01 834 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 IGLON5A6NGN9 336 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 LRRC72A6NJI9 287 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 VILLO15195 856 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 AP1G1O43747 822 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 PALMO75781 387 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 TOP3BO95985 862 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 PRLP01236 227 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 ARL4AP40617 200 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 GRIA4P48058 902 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 CSNK1DP48730 415 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 NEK3P51956 506 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 RACK1P63244 317 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 NSUN2Q08J23 767 aaKnown RBP eCLIP12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 TRAF2Q12933 501 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 ZBTB17Q13105 803 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 KRT81Q14533 505 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 LBRQ14739 615 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 PDK2Q15119 407 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 ZNF423Q2M1K9 1284 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 TSR1Q2NL82 804 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 LRRC38Q5VT99 294 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 HORMAD1Q86X24 394 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 ZNF354CQ86Y25 554 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 CBARPQ8N350 705 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 RYBPQ8N488 228 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 LZTR1Q8N653 840 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 KCTD6Q8NC69 237 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 ALG3Q92685 438 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 CCDC114Q96M63 670 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 GDAP1L1Q96MZ0 367 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 TSGA13Q96PP4 275 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 LGMNQ99538 433 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 BAG1Q99933 345 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 MYOCQ99972 504 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 MGME1Q9BQP7 344 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 GTPBP2Q9BX10 602 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 C1QTNF2Q9BXJ5 285 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 SUV39H2Q9H5I1 410 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 NOD2Q9HC29 1040 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 PREBQ9HCU5 417 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 MBNL1Q9NR56 388 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 DKK3Q9UBP4 350 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 KLF15Q9UIH9 416 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 HPCAL4Q9UM19 191 aa12.78□□□□□ -0.36
RABGGTA-207ENST00000558936 BTNL10A8MVZ5 291 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 SLC31A1O15431 190 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 HTRA2O43464 458 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 FZD6O60353 706 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 KCNK5O95279 499 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 PAK4O96013 591 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 HLA-DQB2P05538 268 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 SYPP08247 313 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 PDHA1P08559 390 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 GIMD1P0DJR0 217 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 TNNT1P13805 278 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 VAV2P52735 878 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 GEMIN4P57678 1058 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 CCZ1BP86790 482 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 CCZ1P86791 482 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 FOXK2Q01167 660 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 HADHQ16836 314 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 UAP1L1Q3KQV9 507 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 PPM1JQ5JR12 505 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 ALG1LQ6GMV1 187 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 RFLNAQ6ZTI6 216 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 BAHD1Q8TBE0 780 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 CENPTQ96BT3 561 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 LRIG1Q96JA1 1093 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 SERAC1Q96JX3 654 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 GAREM1Q9H706 876 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 TOR4AQ9NXH8 423 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 IMPACTQ9P2X3 320 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 COQ6Q9Y2Z9 468 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 PCDHGC4Q9Y5F7 938 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 FRYQ5TBA9 3013 aa12.77□□□□□ -0.37
RABGGTA-207ENST00000558936 COL27A1Q8IZC6 1860 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 PTPRBP23467 1997 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 hCG_1818297A0A087WSY0 165 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 LRRD1A4D1F6 860 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 ZNF487B1APH4 448 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms