RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 PIP5KL1Q5T9C9 394 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 AGBL4Q5VU57 503 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 ERN2Q76MJ5 926 aaKnown RBP17.63■□□□□ 0.41
TPM1-214ENST00000558544 CEP68Q76N32 757 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 ARRDC2Q8TBH0 407 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 VAT1Q99536 393 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 TMEM121Q9BTD3 319 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 BTBD1Q9H0C5 482 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 IRF2BPLQ9H1B7 796 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 SUV39H2Q9H5I1 410 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 WSB2Q9NYS7 404 aaPredicted RBP17.63■□□□□ 0.41
TPM1-214ENST00000558544 TTC7AQ9ULT0 858 aaPredicted RBP17.63■□□□□ 0.41
TPM1-214ENST00000558544 PCDHGC4Q9Y5F7 938 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 SAR1BQ9Y6B6 198 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 F5H423 210 aaPredicted RBP17.62■□□□□ 0.41
TPM1-214ENST00000558544 MAP3K13O43283 966 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 NFKB1P19838 968 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 CASQ1P31415 396 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 CD68P34810 354 aaPredicted RBP17.62■□□□□ 0.41
TPM1-214ENST00000558544 CD86P42081 329 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 NEK3P51956 506 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 ADPRHP54922 357 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 RPL6Q02878 288 aaKnown RBP17.62■□□□□ 0.41
TPM1-214ENST00000558544 TRAF2Q12933 501 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 IHHQ14623 411 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 OASLQ15646 514 aaKnown RBP17.62■□□□□ 0.41
TPM1-214ENST00000558544 LRRC73Q5JTD7 316 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 CFAP58Q5T655 872 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 PRR23BQ6ZRT6 265 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 PID1Q7Z2X4 250 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 PAF1Q8N7H5 531 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 OR14C36Q8NHC7 312 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 ACTRT1Q8TDG2 376 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 PDCD6IPQ8WUM4 868 aaKnown RBP17.62■□□□□ 0.41
TPM1-214ENST00000558544 FAM131CQ96AQ9 280 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 CAPZA3Q96KX2 299 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 ZNF641Q96N77 438 aaPredicted RBP17.62■□□□□ 0.41
TPM1-214ENST00000558544 GPR174Q9BXC1 333 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 HDAC8Q9BY41 377 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 USP29Q9HBJ7 922 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 SGK2Q9HBY8 427 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 GLOD4Q9HC38 313 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 PLXNA2O75051 1894 aa17.62■□□□□ 0.41
TPM1-214ENST00000558544 TRAFD1O14545 582 aaPredicted RBP17.61■□□□□ 0.41
TPM1-214ENST00000558544 NDUFS2O75306 463 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 STK10O94804 968 aaKnown RBP17.61■□□□□ 0.41
TPM1-214ENST00000558544 SEMA4FO95754 770 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 MMP2P08253 660 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 SERPINF2P08697 491 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 ADRB3P13945 408 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 PRLRP16471 622 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 CES1P23141 567 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 ABL2P42684 1182 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 GDF10P55107 478 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 SIM2Q14190 667 aaPredicted RBP17.61■□□□□ 0.41
TPM1-214ENST00000558544 CCNG2Q16589 344 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 FBXL19Q6PCT2 694 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 SLC36A4Q6YBV0 504 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 ZSWIM9Q86XI8 627 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 DEFB119Q8N690 84 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 FAM71DQ8N9W8 422 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 CCDC110Q8TBZ0 833 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 NKD2Q969F2 451 aaPredicted RBP17.61■□□□□ 0.41
TPM1-214ENST00000558544 RBM15Q96T37 977 aaKnown RBP eCLIP17.61■□□□□ 0.41
TPM1-214ENST00000558544 NAP1L3Q99457 506 aaPredicted RBP17.61■□□□□ 0.41
TPM1-214ENST00000558544 AP1M1Q9BXS5 423 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 SLC25A51Q9H1U9 297 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 RRAGDQ9NQL2 400 aaPredicted RBP17.61■□□□□ 0.41
TPM1-214ENST00000558544 DKK3Q9UBP4 350 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 RAI2Q9Y5P3 530 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 TRPM6Q9BX84 2022 aa17.61■□□□□ 0.41
TPM1-214ENST00000558544 SDK1Q7Z5N4 2213 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 TSPAN11A1L157 253 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 CFAP69A5D8W1 941 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 PRR23AA6NEV1 266 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 FAM47DPA6NHR8 397 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 SLC7A4O43246 635 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 PLRG1O43660 514 aaKnown RBP17.6■□□□□ 0.41
TPM1-214ENST00000558544 SOCS5O75159 536 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 ZNF189O75820 626 aaPredicted RBP17.6■□□□□ 0.41
TPM1-214ENST00000558544 SKOR1P84550 965 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 ANKRD20A2Q5SQ80 823 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 ANKRD20A1Q5TYW2 823 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 ANKRD20A3Q5VUR7 823 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 C11orf74Q86VG3 221 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 PRELID2Q8N945 189 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 ECHDC3Q96DC8 303 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 IMP4Q96G21 291 aaKnown RBP17.6■□□□□ 0.41
TPM1-214ENST00000558544 SPATA13Q96N96 652 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 RSPH14Q9UHP6 348 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 TRHDEQ9UKU6 1024 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 ZNF148Q9UQR1 794 aa17.6■□□□□ 0.41
TPM1-214ENST00000558544 RALGAPA1Q6GYQ0 2036 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 HTRA2O43464 458 aaPredicted RBP17.59■□□□□ 0.41
TPM1-214ENST00000558544 ZNF500O60304 480 aaPredicted RBP17.59■□□□□ 0.41
TPM1-214ENST00000558544 TIMP2P16035 220 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 XPAP23025 273 aaPredicted RBP17.59■□□□□ 0.41
TPM1-214ENST00000558544 TAS2R38P59533 333 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 CCDC15Q0P6D6 951 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms