RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MAML1Q92585 1016 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 TUBGCP5Q96RT8 1024 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 LGMNQ99538 433 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 MGME1Q9BQP7 344 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 HEMGNQ9BXL5 484 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 NUSAP1Q9BXS6 441 aaKnown RBP12.5□□□□□ -0.41
SMAD3-205ENST00000558428 SUV39H2Q9H5I1 410 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 ATP13A3Q9H7F0 1226 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 NT5MQ9NPB1 228 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 SCUBE2Q9NQ36 999 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 LZTFL1Q9NQ48 299 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 TPX2Q9ULW0 747 aaKnown RBP12.5□□□□□ -0.41
SMAD3-205ENST00000558428 TTLL3Q9Y4R7 772 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 CEP250Q9BV73 2442 aa12.5□□□□□ -0.41
SMAD3-205ENST00000558428 A0A1B0GTW7 788 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 A0A1W2PPC4 97 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 TTC24A2A3L6 582 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 MIF4GDA9UHW6 222 aaKnown RBP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 BCAT2O15382 392 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 RNGTTO60942 597 aaKnown RBP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 GJB3O75712 270 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 PCDH8O95206 1070 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 CCNB1P14635 433 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 CR2P20023 1033 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 TGM2P21980 687 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 XPAP23025 273 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 CD27P26842 260 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 SERPINA4P29622 427 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 MAT2AP31153 395 aaKnown RBP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 CETN2P41208 172 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 ABL2P42684 1182 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 NR2C2P49116 596 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 IRX4P78413 519 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 BCL2L1Q07817 233 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 ADCY2Q08462 1091 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 PPIDQ08752 370 aaKnown RBP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 ITKQ08881 620 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 AP1B1Q10567 949 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 SLC23A3Q6PIS1 610 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 ZNF662Q6ZS27 426 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 TTC7BQ86TV6 843 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 PRPF39Q86UA1 669 aaKnown RBP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 TRIM69Q86WT6 500 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 CAMK1DQ8IU85 385 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 TEX26Q8N6G2 289 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 ALG3Q92685 438 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 P3H4Q92791 437 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 FATE1Q969F0 183 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 RAB7BQ96AH8 199 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 HAUS1Q96CS2 278 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 PDLIM2Q96JY6 352 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 ZNF641Q96N77 438 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 OLFM3Q96PB7 478 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 NUDCD1Q96RS6 583 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 OSBPL8Q9BZF1 889 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 POLR1EQ9GZS1 481 aaKnown RBP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 HAUS2Q9NVX0 235 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 RBM22Q9NW64 420 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 SAE1Q9UBE0 346 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-205ENST00000558428 DKK3Q9UBP4 350 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 SLC6A14Q9UN76 642 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 PPP2R2CQ9Y2T4 447 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 FADS3Q9Y5Q0 445 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 SLCO1B1Q9Y6L6 691 aa12.49□□□□□ -0.41
SMAD3-205ENST00000558428 DNAH14Q0VDD8 3507 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-205ENST00000558428 A0A1W2PQU0 124 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 PRR5-ARHGAP8B1AHC4 643 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 C10orf142B7Z368 130 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 KCNK1O00180 336 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 NEMP1O14524 444 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 DDX3YO15523 660 aaKnown RBP12.48□□□□□ -0.41
SMAD3-205ENST00000558428 LATO43561 262 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 AP1G1O43747 822 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 SERPINF2P08697 491 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 PYGMP11217 842 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 PECAM1P16284 738 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-205ENST00000558428 LMNB2Q03252 620 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 LRRC73Q5JTD7 316 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 CCDC181Q5TID7 509 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 AADACL2Q6P093 401 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 NEK5Q6P3R8 708 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 BRAT1Q6PJG6 821 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 BBS12Q6ZW61 710 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 B4GALNT4Q76KP1 1039 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 HORMAD1Q86X24 394 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 C1orf216Q8TAB5 229 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 HCAR2Q8TDS4 363 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 FEM1CQ96JP0 617 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 ALS2CR12Q96Q35 445 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 SEMA3CQ99985 751 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 ORAI3Q9BRQ5 295 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 EDEM2Q9BV94 578 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 BRD8Q9H0E9 1235 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 EBF2Q9HAK2 575 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 NOD2Q9HC29 1040 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 CAPN10Q9HC96 672 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 TM9SF3Q9HD45 589 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 FSCN3Q9NQT6 498 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 SEPT10Q9P0V9 454 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms