RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 TADA2BQ86TJ2 420 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 RPAINQ86UA6 219 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 CCDC25Q86WR0 208 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 CPNE8Q86YQ8 564 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 NLGN4XQ8N0W4 816 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 SH2D3CQ8N5H7 860 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 OTUD6BQ8N6M0 293 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 TOP6BLQ8N6T0 577 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 GBP7Q8N8V2 638 aaPredicted RBP7.37□□□□□ -1.23
MARK3-212ENST00000558223 ELOA3Q8NG57 546 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 MYCBPAPQ8TBZ2 947 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 SPPL3Q8TCT6 385 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.37□□□□□ -1.23
MARK3-212ENST00000558223 ZNF473Q8WTR7 871 aaKnown RBP7.37□□□□□ -1.23
MARK3-212ENST00000558223 TSPEARQ8WU66 669 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 HERVK_113Q902F9 699 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 ARHGEF2Q92974 986 aaKnown RBP7.37□□□□□ -1.23
MARK3-212ENST00000558223 ATP2A3Q93084 1043 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 FATE1Q969F0 183 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 LRRC39Q96DD0 335 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 SPATA17Q96L03 361 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 KCNC2Q96PR1 638 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 XPO6Q96QU8 1125 aaKnown RBP7.37□□□□□ -1.23
MARK3-212ENST00000558223 RBM15Q96T37 977 aaKnown RBP eCLIP7.37□□□□□ -1.23
MARK3-212ENST00000558223 TRIM62Q9BVG3 475 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 HEMGNQ9BXL5 484 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 SLC12A9Q9BXP2 914 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 ELOVL4Q9GZR5 314 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 CDIP1Q9H305 208 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 EPB41L4BQ9H329 900 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 SNX25Q9H3E2 840 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 GHITMQ9H3K2 345 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 SERHLQ9NQF3 203 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 NKIRAS1Q9NYS0 192 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 PAK5Q9P286 719 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 CPNE7Q9UBL6 633 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 CHORDC1Q9UHD1 332 aaPredicted RBP7.37□□□□□ -1.23
MARK3-212ENST00000558223 VPS28Q9UK41 221 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 USP18Q9UMW8 372 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 SMG5Q9UPR3 1016 aaKnown RBP7.37□□□□□ -1.23
MARK3-212ENST00000558223 ATP23Q9Y6H3 246 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 LRRC37A2A6NM11 1700 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 OTOFQ9HC10 1997 aa7.37□□□□□ -1.23
MARK3-212ENST00000558223 ZNF236Q9UL36 1845 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 C17orf102A2RUQ5 167 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 C2CD4BA6NLJ0 364 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 GOLGA8SH3BPF8 625 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 H7BY64 318 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 SGK1O00141 431 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 MASP2O00187 686 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 PIRO00625 290 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 DOK2O60496 412 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 CST8O60676 142 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 PEX10O60683 326 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 APOL3O95236 402 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 CELF2O95319 508 aaKnown RBP7.36□□□□□ -1.23
MARK3-212ENST00000558223 IQCF3P0C7M6 154 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 AKR1A1P14550 325 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 HNRNPLP14866 589 aaKnown RBP eCLIP7.36□□□□□ -1.233e-8■■■□□ 16.1
MARK3-212ENST00000558223 PDGFRAP16234 1089 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 PSMA3P25788 255 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 MIPP30301 263 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 LRPAP1P30533 357 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 HOXA11P31270 313 aaPredicted RBP7.36□□□□□ -1.23
MARK3-212ENST00000558223 BMP8BP34820 402 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 GNL1P36915 607 aaPredicted RBP7.36□□□□□ -1.23
MARK3-212ENST00000558223 STAT5AP42229 794 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 WASP42768 502 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 RPL34P49207 117 aaKnown RBP7.36□□□□□ -1.23
MARK3-212ENST00000558223 TAF6P49848 677 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 ARF3P61204 181 aaPredicted RBP7.36□□□□□ -1.23
MARK3-212ENST00000558223 NKX3-2P78367 333 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 ADAM17P78536 824 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 SARNPP82979 210 aaKnown RBP7.36□□□□□ -1.23
MARK3-212ENST00000558223 ARF1P84077 181 aaKnown RBP7.36□□□□□ -1.23
MARK3-212ENST00000558223 DSC2Q02487 901 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 BST2Q10589 180 aaKnown RBP7.36□□□□□ -1.23
MARK3-212ENST00000558223 SREBF2Q12772 1141 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 MALLQ13021 153 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 GPS1Q13098 491 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 TUSC3Q13454 348 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 LAPTM5Q13571 262 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 ITIH4Q14624 930 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 P3H1Q32P28 736 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 LGSNQ5TDP6 509 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 OR6B2Q6IFH4 312 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 CNKSR3Q6P9H4 555 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 CHSY3Q70JA7 882 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 SLC26A9Q7LBE3 791 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 STRADAQ7RTN6 431 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 PDIK1LQ8N165 341 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 TMEM86AQ8N2M4 240 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 RAPGEF5Q92565 580 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 TBC1D31Q96DN5 1066 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 CABS1Q96KC9 395 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 MSLNLQ96KJ4 702 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 CPXM1Q96SM3 734 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 ZNF670Q9BS34 389 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 EIF2AQ9BY44 585 aaKnown RBP7.36□□□□□ -1.23
MARK3-212ENST00000558223 TMPRSS13Q9BYE2 586 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms