RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 NSMCE1Q8WV22 266 aa12.22□□□□□ -0.45
HMGB1P8-201ENST00000558211 TNKS2Q9H2K2 1166 aa12.22□□□□□ -0.45
HMGB1P8-201ENST00000558211 CHRDQ9H2X0 955 aa12.22□□□□□ -0.45
HMGB1P8-201ENST00000558211 C10orf88Q9H8K7 445 aa12.22□□□□□ -0.45
HMGB1P8-201ENST00000558211 SPATA6Q9NWH7 488 aaPredicted RBP12.22□□□□□ -0.45
HMGB1P8-201ENST00000558211 C2orf42Q9NWW7 574 aa12.22□□□□□ -0.45
HMGB1P8-201ENST00000558211 SEPT10Q9P0V9 454 aa12.22□□□□□ -0.45
HMGB1P8-201ENST00000558211 SNX12Q9UMY4 172 aa12.22□□□□□ -0.45
HMGB1P8-201ENST00000558211 APOC4-APOC2K7ER74 178 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 DLL1O00548 723 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 PPP1R12AO14974 1030 aaPredicted RBP12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 NPC1O15118 1278 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 SYNCRIPO60506 623 aaKnown RBP12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 MMP20O60882 483 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 ADAM23O75077 832 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 ATG13O75143 517 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 NEBLO76041 1014 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 TMCC1O94876 653 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 CD160O95971 181 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 APOC2P02655 101 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 ZNF16P17020 682 aaPredicted RBP12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 RPS9P46781 194 aaKnown RBP12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 NR2C2P49116 596 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 GEMIN4P57678 1058 aaKnown RBP12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 EIF3EP60228 445 aaKnown RBP12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 SLC20A2Q08357 652 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 MTAPQ13126 283 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 CYTH1Q15438 398 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 CHSY3Q70JA7 882 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 BMP8AQ7Z5Y6 402 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 CCDC13Q8IYE1 715 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 RYBPQ8N488 228 aaPredicted RBP12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 TMEM105Q8N8V8 129 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 CAPZA3Q96KX2 299 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 TM6SF2Q9BZW4 377 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 TMEM245Q9H330 911 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 PDFQ9HBH1 243 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 DNAJB12Q9NXW2 375 aaKnown RBP12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 SMARCAL1Q9NZC9 954 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 SUN2Q9UH99 717 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 MMP17Q9ULZ9 603 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 HS3ST2Q9Y278 367 aa12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 R3HDM2Q9Y2K5 976 aaKnown RBP12.21□□□□□ -0.45
HMGB1P8-201ENST00000558211 CHURC1-FNTBB4DL54 471 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 KCNK1O00180 336 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 MCF2LO15068 1137 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 FANCGO15287 622 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 TCP1P17987 556 aaKnown RBP12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 CCNCP24863 283 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 RECQLP46063 649 aaPredicted RBP12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 RHOAP61586 193 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 PPIDQ08752 370 aaKnown RBP12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 SLC10A7Q0GE19 358 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 KLF1Q13351 362 aaPredicted RBP12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 SNX1Q13596 522 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 STARD3Q14849 445 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 NOMO1Q15155 1222 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 PAPD7Q5XG87 772 aaKnown RBP12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 TIGD7Q6NT04 549 aaPredicted RBP12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 KIAA1211LQ6NV74 962 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 C22orf39Q6P5X5 142 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 DARS2Q6PI48 645 aaKnown RBP12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 CACUL1Q86Y37 369 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 LRRC49Q8IUZ0 686 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 SPEM1Q8N4L4 309 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 FRS2Q8WU20 508 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 TFB1MQ8WVM0 346 aaKnown RBP12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 C1orf54Q8WWF1 131 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 ATG4AQ8WYN0 398 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 HDAC11Q96DB2 347 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 EXOC2Q96KP1 924 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 OLFM3Q96PB7 478 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 CINPQ9BW66 212 aaPredicted RBP12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 CEP41Q9BYV8 373 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 DLGAP2Q9P1A6 1054 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 TTLL3Q9Y4R7 772 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 SAR1BQ9Y6B6 198 aa12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 MUC22E2RYF6 1773 aaPredicted RBP12.2□□□□□ -0.46
HMGB1P8-201ENST00000558211 EDDM13A0A1B0GTR0 161 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 MATN3O15232 486 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 JCHAINP01591 159 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 RBP3P10745 1247 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 CCNB1P14635 433 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 PCSK2P16519 638 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 RBL1P28749 1068 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 AVPR2P30518 371 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 MAGEA9P43362 315 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 CXCL12P48061 93 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 MAXP61244 160 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 SATB1Q01826 763 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 ITKQ08881 620 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZNF235Q14590 738 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 CRY1Q16526 586 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 HNRNPA1L2Q32P51 320 aaKnown RBP12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 HSF5Q4G112 596 aaPredicted RBP12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 INO80DQ53TQ3 878 aaPredicted RBP12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 TMEM31Q5JXX7 168 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 ATXN7L2Q5T6C5 722 aaPredicted RBP12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 MARC1Q5VT66 337 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms