RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 PTPRCAPQ14761 206 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 KIF19Q2TAC6 998 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 VPS26BQ4G0F5 336 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 ACBD5Q5T8D3 534 aaPredicted RBP12.45□□□□□ -0.42
LDLR-205ENST00000557933 POTEHQ6S545 545 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 ZYG11AQ6WRX3 759 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 OSTM1Q86WC4 334 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 SIX6OS1Q8N1H7 587 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 CNTD1Q8N815 330 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 GTF3C2Q8WUA4 911 aaPredicted RBP12.45□□□□□ -0.42
LDLR-205ENST00000557933 APBB2Q92870 758 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 ZFRQ96KR1 1074 aaKnown RBP12.45□□□□□ -0.42
LDLR-205ENST00000557933 C3orf30Q96M34 536 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 C11orf84Q9BUA3 381 aaPredicted RBP12.45□□□□□ -0.42
LDLR-205ENST00000557933 ASB7Q9H672 318 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 CACNA2D2Q9NY47 1150 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 THEGQ9P2T0 379 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 PRPF19Q9UMS4 504 aaKnown RBP12.45□□□□□ -0.42
LDLR-205ENST00000557933 ACOT9Q9Y305 439 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 HTTP42858 3142 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 MRASO14807 208 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 HTRA2O43464 458 aaPredicted RBP12.45□□□□□ -0.42
LDLR-205ENST00000557933 DDHD2O94830 711 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 KCNH1O95259 989 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 ATE1O95260 518 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 SIX3O95343 332 aaPredicted RBP12.45□□□□□ -0.42
LDLR-205ENST00000557933 LRPAP1P30533 357 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 ADCYAP1R1P41586 468 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 PTPN9P43378 593 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 MAXP61244 160 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 ECT2LQ008S8 904 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 SULT2A1Q06520 285 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 CACNB2Q08289 660 aaPredicted RBP12.45□□□□□ -0.42
LDLR-205ENST00000557933 BNIP3Q12983 259 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 TRIM25Q14258 630 aaKnown RBP12.45□□□□□ -0.42
LDLR-205ENST00000557933 INSCQ1MX18 579 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 FGD3Q5JSP0 725 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 TMEM26Q6ZUK4 368 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 ANKRD52Q8NB46 1076 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 SGCDQ92629 289 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 CCDC28BQ9BUN5 200 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 FICDQ9BVA6 458 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 NDFIP2Q9NV92 336 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 SMOXQ9NWM0 555 aa12.45□□□□□ -0.42
LDLR-205ENST00000557933 PSMD12O00232 456 aaPredicted RBP12.44□□□□□ -0.42
LDLR-205ENST00000557933 AP1G1O43747 822 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 SUPT7LO94864 414 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 H6PDO95479 791 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 MOCS2O96007 188 aaPredicted RBP12.44□□□□□ -0.42
LDLR-205ENST00000557933 MLNP12872 115 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 BDNFP23560 247 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 GRM5P41594 1212 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 KCNC1P48547 511 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 OR52K2Q8NGK3 314 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 GIPC3Q8TF64 312 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 C12orf43Q96C57 262 aaKnown RBP12.44□□□□□ -0.42
LDLR-205ENST00000557933 CNDP1Q96KN2 507 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 SMARCAD1Q9H4L7 1026 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 BTRCQ9Y297 605 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 MYRFQ9Y2G1 1151 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 LCTP09848 1927 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 TRIM38O00635 465 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 UBDO15205 165 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 HBP1O60381 514 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 PENKP01210 267 aaPredicted RBP12.44□□□□□ -0.42
LDLR-205ENST00000557933 SLC25A52Q3SY17 297 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 OTUD3Q5T2D3 398 aaPredicted RBP12.44□□□□□ -0.42
LDLR-205ENST00000557933 WSCD1Q658N2 575 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 TTC33Q6PID6 262 aaPredicted RBP12.44□□□□□ -0.42
LDLR-205ENST00000557933 RETREG3Q86VR2 466 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 CHST13Q8NET6 341 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 ANKRD49Q8WVL7 239 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 CENPIQ92674 756 aaPredicted RBP12.44□□□□□ -0.42
LDLR-205ENST00000557933 HBEGFQ99075 208 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 SEPHS2Q99611 448 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 ALG9Q9H6U8 611 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 ERAP1Q9NZ08 941 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 CRYL1Q9Y2S2 319 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 SH3BP1Q9Y3L3 701 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 MAGED1Q9Y5V3 778 aaPredicted RBP12.44□□□□□ -0.42
LDLR-205ENST00000557933 LRRC37A2A6NM11 1700 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 GIPC1O14908 333 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 MAN1A2O60476 641 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 PIRTP0C851 137 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 CYP2C8P10632 490 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 STMN1P16949 149 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 PRKCQQ04759 706 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 FAM83EQ2M2I3 478 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 MAP7D1Q3KQU3 841 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 FBXO47Q5MNV8 452 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 STXBP5Q5T5C0 1151 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 DNAJB14Q8TBM8 379 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 ESAMQ96AP7 390 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 OLFM1Q99784 485 aa12.44□□□□□ -0.42
LDLR-205ENST00000557933 A0A1B0GTL3 188 aa12.43□□□□□ -0.42
LDLR-205ENST00000557933 HEATR9A2RTY3 570 aa12.43□□□□□ -0.42
LDLR-205ENST00000557933 H3BMM5 538 aa12.43□□□□□ -0.42
LDLR-205ENST00000557933 GJB3O75712 270 aa12.43□□□□□ -0.42
LDLR-205ENST00000557933 FYNP06241 537 aa12.43□□□□□ -0.42
LDLR-205ENST00000557933 CCDC166P0CW27 439 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms