RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 U3KQA8 63 aa7.01□□□□□ -1.29
SPTLC2-206ENST00000557566 UBE4BO95155 1302 aa7.01□□□□□ -1.29
SPTLC2-206ENST00000557566 APCP25054 2843 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 PCNX1Q96RV3 2341 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TBC1D3DA0A087WVF3 549 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TBC1D3IA0A087WXS9 549 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TBC1D3EA0A087X179 549 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TBC1D3KA0A087X1G2 549 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 TMEM238LA0A1B0GVL6 79 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 A1L4Q6 167 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 CPED1A4D0V7 1026 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TBC1D3FA6NER0 549 aaPredicted RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 A8MXQ7 604 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TMCO5BA8MYB1 307 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TBC1D3LB9A6J9 549 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 PDE2AO00408 941 aaPredicted RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 MDM4O15151 490 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 EIF3HO15372 352 aaKnown RBP eCLIP7□□□□□ -1.29
SPTLC2-206ENST00000557566 KRT86O43790 486 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TBCAO75347 108 aaKnown RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 PIAS2O75928 621 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 NDUFA10O95299 355 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TNNC2P02585 160 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 KLKB1P03952 638 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 KRT18P05783 430 aaKnown RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 DLDP09622 509 aaKnown RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 FAM163BP0C2L3 166 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 RHOXF2BP0C7M4 288 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TBC1D3HP0C7X1 549 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 GIMD1P0DJR0 217 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 RARGP13631 454 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 ACPPP15309 386 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 GOT1P17174 413 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 EEF1GP26641 437 aaKnown RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 HLA-FP30511 346 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 CORO1AP31146 461 aaKnown RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 CYLC1P35663 651 aaPredicted RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 DCTP40126 519 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 PPP1R2P41236 205 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 IRAK1P51617 712 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 COPB1P53618 953 aaKnown RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 PPP2CBP62714 309 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 PPP2CAP67775 309 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 COG7P83436 770 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 ZNF177Q13360 481 aaPredicted RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 MEA1Q16626 185 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 GLE1Q53GS7 698 aaKnown RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 ARSHQ5FYA8 562 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 FIGNQ5HY92 759 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TBC1D3GQ6DHY5 549 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TBC1D3CQ6IPX1 549 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 ZCCHC8Q6NZY4 707 aaKnown RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 DTHD1Q6ZMT9 781 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 EFL1Q7Z2Z2 1120 aaKnown RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 DSG4Q86SJ6 1040 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 VASH2Q86V25 355 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 TAX1BP1Q86VP1 789 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 GPBP1Q86WP2 473 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 SRRM1Q8IYB3 904 aaKnown RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 TBC1D3Q8IZP1 549 aaPredicted RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 AHI1Q8N157 1196 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 CPXM2Q8N436 756 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 NOA1Q8NC60 698 aaKnown RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 OR8K1Q8NGG5 319 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 C9orf43Q8TAL5 461 aaPredicted RBP7□□□□□ -1.29
SPTLC2-206ENST00000557566 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7□□□□□ -1.29
SPTLC2-206ENST00000557566 CAVIN3Q969G5 261 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 PLD4Q96BZ4 506 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 MOCOSQ96EN8 888 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 SAAL1Q96ER3 474 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 KLHDC7BQ96G42 594 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 RHOXF2Q9BQY4 288 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 CAPS2Q9BXY5 557 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 ST6GALNAC4Q9H4F1 302 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 KRT82Q9NSB4 513 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 KLHL11Q9NVR0 708 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7□□□□□ -1.29
SPTLC2-206ENST00000557566 RNF14Q9UBS8 474 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 NUDT5Q9UKK9 219 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 NME7Q9Y5B8 376 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 FAM169AQ9Y6X4 670 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 ESPL1Q14674 2120 aa7□□□□□ -1.29
SPTLC2-206ENST00000557566 A0A1W2PQJ5 194 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 GOLGA6CA6NDK9 693 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 GOLGA6BA6NDN3 693 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 PRAMEF26H0Y7S4 382 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 TMX2-CTNND1H3BSU7 103 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 K7ESM1 405 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 SCAMP1O15126 338 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 SMNDC1O75940 238 aaKnown RBP eCLIP6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 GOLGA6DP0CG33 693 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 POLR2EP19388 210 aaKnown RBP6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 HOXD9P28356 352 aaPredicted RBP6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 MAT2AP31153 395 aaKnown RBP6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 SLC8A1P32418 973 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 UGT1A5P35504 534 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 KRT9P35527 623 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 PRPHP41219 470 aa6.99□□□□□ -1.29
SPTLC2-206ENST00000557566 ST8SIA6P61647 398 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms