RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TMEM74Q96NL1 305 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 PRMT1Q99873 361 aaKnown RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 DUSP23Q9BVJ7 150 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 MIS12Q9H081 205 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 USP29Q9HBJ7 922 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 DNAJC28Q9NX36 388 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 ZDHHC3Q9NYG2 299 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 GDF2Q9UK05 429 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 INTUQ9ULD6 942 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 KIAA1257Q9ULG3 409 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 COQ4Q9Y3A0 265 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 ENTPD2Q9Y5L3 495 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 HEMK1Q9Y5R4 338 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-207ENST00000557470 AHCTF1Q8WYP5 2266 aa5.99□□□□□ -1.45
VPS33B-207ENST00000557470 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 A0A1B0GVL5 298 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 CPED1A4D0V7 1026 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 TCAF2A6NFQ2 919 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 A6NNZ2 444 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 KCNU1A8MYU2 1149 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 F5H5T6 163 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 RNF103O00237 685 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 KPNA3O00505 521 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 ALOX15BO15296 676 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 EFSO43281 561 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 IGLV3-25P01717 112 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 PAEPP09466 180 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 ZSCAN22P10073 491 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 NME1P15531 152 aaKnown RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 TBXAS1P24557 533 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 IRAK1P51617 712 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 PDX1P52945 283 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 HNRNPKP61978 463 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 PITX1P78337 314 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 NUCB2P80303 420 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 ZNF177Q13360 481 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 FZD2Q14332 565 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 CNGA2Q16280 664 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 C21orf62-AS1Q17RA5 79 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 EDRF1Q3B7T1 1238 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 LINC00303Q3SY05 128 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 COLEC12Q5KU26 742 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 PERM1Q5SV97 790 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 TCERG1LQ5VWI1 586 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 ZCCHC8Q6NZY4 707 aaKnown RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 FBXL22Q6P050 247 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 NEK5Q6P3R8 708 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 RBM44Q6ZP01 1051 aaKnown RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 Q6ZSR6 202 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 EFL1Q7Z2Z2 1120 aaKnown RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 CLEC14AQ86T13 490 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 THNSL2Q86YJ6 484 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 SMYD4Q8IYR2 804 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 ARL14Q8N4G2 192 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 SH2D3CQ8N5H7 860 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 OR2A12Q8NGT7 310 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 ERCC4Q92889 916 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 KAT5Q92993 513 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 GRAMD1AQ96CP6 724 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 ALG14Q96F25 216 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 IFT43Q96FT9 208 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 BTN2A3PQ96KV6 586 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 CCNL2Q96S94 520 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 FEM1AQ9BSK4 669 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 GPR27Q9NS67 375 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 STARD5Q9NSY2 213 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 ACTR10Q9NZ32 417 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 USP25Q9UHP3 1055 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 KLF15Q9UIH9 416 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 SLC25A13Q9UJS0 675 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 VPS28Q9UK41 221 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 ZFR2Q9UPR6 939 aaKnown RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 HPSEQ9Y251 543 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 PCDHB4Q9Y5E5 795 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 PCDHGA8Q9Y5G5 932 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 OR51B4Q9Y5P0 310 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 DOPEY2Q9Y3R5 2298 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 TDRD6O60522 2096 aaKnown RBP5.98□□□□□ -1.45
VPS33B-207ENST00000557470 KIF26BQ2KJY2 2108 aa5.98□□□□□ -1.45
VPS33B-207ENST00000557470 SPTY2D1-AS1A0A0U1RR47 76 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 EME2A4GXA9 379 aaPredicted RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 POM121BA6NF01 834 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 K7ERQ8 282 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 MUSKO15146 869 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 CETN3O15182 167 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 RAD51BO15315 384 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 SLC16A3O15427 465 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 SART1O43290 800 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 AQP9O43315 295 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 TCEA3O75764 348 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 TNFSF15O95150 251 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 PCDH8O95206 1070 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 TRUB2O95900 331 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 MT-CO1P00395 513 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 F13A1P00488 732 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 CSF2P04141 144 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 ITGA2BP08514 1039 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 SRCP12931 536 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 RRM1P23921 792 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms