RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 JPH3Q8WXH2 748 aaPredicted RBP12.72□□□□□ -0.37
PSEN1-221ENST00000557293 ISG20Q96AZ6 181 aaKnown RBP12.72□□□□□ -0.37
PSEN1-221ENST00000557293 TMEM159Q96B96 161 aa12.72□□□□□ -0.37
PSEN1-221ENST00000557293 C1orf74Q96LT6 269 aa12.72□□□□□ -0.37
PSEN1-221ENST00000557293 TKTL2Q9H0I9 626 aa12.72□□□□□ -0.37
PSEN1-221ENST00000557293 SEMA6CQ9H3T2 930 aa12.72□□□□□ -0.37
PSEN1-221ENST00000557293 ZDHHC6Q9H6R6 413 aa12.72□□□□□ -0.37
PSEN1-221ENST00000557293 TUBD1Q9UJT1 453 aa12.72□□□□□ -0.37
PSEN1-221ENST00000557293 RNF215Q9Y6U7 377 aa12.72□□□□□ -0.37
PSEN1-221ENST00000557293 SDK2Q58EX2 2172 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 SPTAN1Q13813 2472 aaKnown RBP12.71□□□□□ -0.37
PSEN1-221ENST00000557293 LRRK1Q38SD2 2015 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 BECN2A8MW95 431 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 TOR1BO14657 336 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 THAP12O43422 761 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 DAB1O75553 588 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 ERBB2P04626 1255 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 ALPIP09923 528 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 OR1E1P30953 314 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 PEX5P50542 639 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 POLE2P56282 527 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 B4GALNT1Q00973 533 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 PNOCQ13519 176 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 LRRC73Q5JTD7 316 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 BRMS1LQ5PSV4 323 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 ZNF658Q5TYW1 1059 aaPredicted RBP12.71□□□□□ -0.37
PSEN1-221ENST00000557293 RETSATQ6NUM9 610 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 BORAQ6PGQ7 559 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 SLC26A9Q7LBE3 791 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 SPRED1Q7Z699 444 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 FAM26EQ8N5C1 309 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 ZNF397Q8NF99 534 aaPredicted RBP12.71□□□□□ -0.37
PSEN1-221ENST00000557293 OR6C4Q8NGE1 309 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 OR6K2Q8NGY2 324 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 SCG3Q8WXD2 468 aaKnown RBP12.71□□□□□ -0.37
PSEN1-221ENST00000557293 PMEPA1Q969W9 287 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 KLHL32Q96NJ5 620 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 EPAS1Q99814 870 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 TSG101Q99816 390 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 TM6SF2Q9BZW4 377 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 WDCPQ9H6R7 721 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 ANAPC2Q9UJX6 822 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 PCDHB11Q9Y5F2 797 aa12.71□□□□□ -0.37
PSEN1-221ENST00000557293 DOCK4Q8N1I0 1966 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 NEMP1O14524 444 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 MED7O43513 233 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 TM7SF2O76062 418 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 KRT5P13647 590 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 CTSEP14091 401 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 TIMP2P16035 220 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 PNLIPP16233 465 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 GLB1P16278 677 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 CD82P27701 267 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 ACVRL1P37023 503 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 BLKP51451 505 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 SLC6A3Q01959 620 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 GNA12Q03113 381 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 LRRC63Q05C16 580 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 NCAPHQ15003 741 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 IRF4Q15306 451 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 KLHL40Q2TBA0 621 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 WSCD2Q2TBF2 565 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 MYLK3Q32MK0 819 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 CERCAMQ5T4B2 595 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 ZNF783Q6ZMS7 281 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 C11orf57Q6ZUT1 292 aaPredicted RBP12.7□□□□□ -0.38
PSEN1-221ENST00000557293 RD3Q7Z3Z2 195 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 PGAP3Q96FM1 320 aaPredicted RBP12.7□□□□□ -0.38
PSEN1-221ENST00000557293 SPATA32Q96LK8 384 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 CMKLR1Q99788 373 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 APOOQ9BUR5 198 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 GTPBP4Q9BZE4 634 aaKnown RBP12.7□□□□□ -0.38
PSEN1-221ENST00000557293 ATP13A1Q9HD20 1204 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 UBE2TQ9NPD8 197 aaPredicted RBP12.7□□□□□ -0.38
PSEN1-221ENST00000557293 NDFIP2Q9NV92 336 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 DOLKQ9UPQ8 538 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 PLAAQ9Y263 795 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 ZDHHC9Q9Y397 364 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 LRP4O75096 1905 aa12.7□□□□□ -0.38
PSEN1-221ENST00000557293 MYO9AB2RTY4 2548 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 ICE1Q9Y2F5 2266 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 CXorf51AA0A1B0GTR3 108 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 TMEM110-MUSTN1A8MSY1 372 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 RASGRP1O95267 797 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 POP4O95707 220 aaKnown RBP12.69□□□□□ -0.38
PSEN1-221ENST00000557293 UGT2B4P06133 528 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 FGF3P11487 239 aaPredicted RBP12.69□□□□□ -0.38
PSEN1-221ENST00000557293 CD44P16070 742 aaKnown RBP12.69□□□□□ -0.38
PSEN1-221ENST00000557293 GNA15P30679 374 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 SRP54P61011 504 aaKnown RBP12.69□□□□□ -0.38
PSEN1-221ENST00000557293 HLTFQ14527 1009 aaKnown RBP eCLIP12.69□□□□□ -0.38
PSEN1-221ENST00000557293 TMEM52BQ4KMG9 183 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 EFHC2Q5JST6 749 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 GJB7Q6PEY0 223 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 ENPP7Q6UWV6 458 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 TTC7BQ86TV6 843 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 GKN2Q86XP6 184 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 SPATA20Q8TB22 786 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 MIB2Q96AX9 1013 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 RBM15Q96T37 977 aaKnown RBP eCLIP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms